Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0033
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 518 WRCCSFFVYILNSFFILPTLSVIFYFIFTKY 610
           W+C  FFV +L   FIL        F FT++
Sbjct: 305 WKCLLFFVSVL---FILLVKEGEVAFFFTQF 332


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 518 WRCCSFFVYILNSFFILPTLSVIFYFIFTKY 610
           W+C  FFV +L   FIL        F FT++
Sbjct: 305 WKCLLFFVSVL---FILLVKEGEVAFFFTQF 332


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 518 WRCCSFFVYILNSFFILPTLSVIFYFIFTKY 610
           W+C  FFV +L   FIL        F FT++
Sbjct: 305 WKCLLFFVSVL---FILLVKEGEVAFFFTQF 332


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 518 WRCCSFFVYILNSFFILPTLSVIFYFIFTKY 610
           W+C  FFV +L   FIL        F FT++
Sbjct: 305 WKCLLFFVSVL---FILLVKEGEVAFFFTQF 332


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
          5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -1

Query: 82 CSECLHPETAPLDSTHALWAHTDCTA 5
          C EC +PET  L ST        C A
Sbjct: 13 CPECENPETELLVSTKRSTISQGCKA 38


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +2

Query: 524 CCSFFVYILNSFFILPTLSVIFYF 595
           CC+F ++ ++  F+L     I+YF
Sbjct: 269 CCAFIIFTMHLLFLL----CIYYF 288


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +2

Query: 581 VIFYFIFTKYYNYRNS 628
           ++ Y+I++K+Y+Y  S
Sbjct: 11  LLLYYIYSKHYSYWQS 26


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +2

Query: 527 CSFFVYILNSFFILPT-LSVIFYFIFTK 607
           C FF+  +  FFI P  + +I Y +  K
Sbjct: 235 CVFFLGSILIFFIFPLAILIIVYILIAK 262


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 75  NVSTPKQHR*IQHTHFGHTLTAQHN 1
           N +T  Q+    H H GH + AQH+
Sbjct: 314 NAATNNQNH---HHHAGHHIHAQHH 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,774
Number of Sequences: 336
Number of extensions: 3277
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)