Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0031
(350 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein. 50 2e-06
BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein. 50 2e-06
BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein. 50 2e-06
AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated tra... 50 2e-06
AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated tr... 50 2e-06
AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens ... 50 2e-06
AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane trans... 50 2e-06
AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated tr... 50 2e-06
AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated tr... 50 2e-06
D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein. 48 8e-06
CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein. 48 8e-06
BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated pr... 48 8e-06
BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated pr... 48 8e-06
BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated pr... 48 8e-06
AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein. 48 8e-06
AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein. 41 0.001
AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated pro... 40 0.002
AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated pro... 40 0.002
AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein. 40 0.002
BC041629-1|AAH41629.1| 264|Homo sapiens MAZ protein protein. 29 3.1
AF489858-1|AAN03800.1| 493|Homo sapiens serum amyloid A activat... 29 3.1
BC133703-1|AAI33704.1| 1504|Homo sapiens RAPGEF6 protein protein. 28 9.5
AK095698-1|BAC04613.1| 242|Homo sapiens protein ( Homo sapiens ... 28 9.5
AF478567-1|AAM21637.1| 1601|Homo sapiens PDZ domain-containing g... 28 9.5
AF478468-1|AAL79915.1| 1601|Homo sapiens Rap1 guanine nucleotide... 28 9.5
AF394782-1|AAK83368.1| 1509|Homo sapiens rap guanine nucleotide ... 28 9.5
AC093642-1|AAY15000.1| 242|Homo sapiens unknown protein. 28 9.5
>BC038117-1|AAH38117.1| 317|Homo sapiens LAPTM4B protein protein.
Length = 317
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
>BC031021-1|AAH31021.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>BC014129-1|AAH14129.1| 226|Homo sapiens LAPTM4B protein protein.
Length = 226
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>AY261384-1|AAO84265.1| 370|Homo sapiens lysosome-associated
transmembrane protein 4 beta protein.
Length = 370
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 159 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 194
>AY057051-1|AAL17908.2| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta, variant 1 protein.
Length = 317
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
>AK075326-1|BAC11549.1| 226|Homo sapiens protein ( Homo sapiens
cDNA PSEC0001 fis, clone NT2RM1000066, moderately
similar to Lysosomal-associated transmembrane protein 4
beta. ).
Length = 226
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>AJ276485-1|CAB81951.1| 283|Homo sapiens integral membrane
transporter protein protein.
Length = 283
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 72 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 107
>AF527412-1|AAP14034.1| 317|Homo sapiens lysosomal associated
transmembrane protein 4 beta variant 2 protein.
Length = 317
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 106 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 141
>AF317417-1|AAK69595.1| 226|Homo sapiens lysosomal-associated
transmembrane protein 4 beta protein.
Length = 226
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDP 242
CC C HVRTGTI+LG W+L ++ V L +L + + DP
Sbjct: 15 CCLCCHVRTGTILLGVWYLIINAVVLLILLSALADP 50
>D14696-1|BAA03522.2| 254|Homo sapiens KIAA0108 protein.
Length = 254
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 32 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 91
Query: 291 SNVGRTGD 314
+ R D
Sbjct: 92 YSSERMAD 99
>CR456758-1|CAG33039.1| 233|Homo sapiens LAPTM4A protein.
Length = 233
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 291 SNVGRTGD 314
+ R D
Sbjct: 71 YSSERMAD 78
>BC093075-1|AAH93075.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 291 SNVGRTGD 314
+ R D
Sbjct: 71 YSSERMAD 78
>BC003158-1|AAH03158.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 291 SNVGRTGD 314
+ R D
Sbjct: 71 YSSERMAD 78
>BC000421-1|AAH00421.1| 233|Homo sapiens lysosomal-associated
protein transmembrane 4 alpha protein.
Length = 233
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 291 SNVGRTGD 314
+ R D
Sbjct: 71 YSSERMAD 78
>AY359028-1|AAQ89387.1| 215|Homo sapiens MTP protein.
Length = 215
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
S+R CC C HVRTGTIILG+W++ ++L+ +L V P + ++ + + ++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYMVVNLLMAILLTVEVTHPNSMPAVNIQYEVIGNY 70
Query: 291 SNVGRTGD 314
+ R D
Sbjct: 71 YSSERMAD 78
>AC098828-1|AAY24172.1| 38|Homo sapiens unknown protein.
Length = 38
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 111 SERGSEWLCCFCLHVRTGTIILGSWHL 191
S+R CC C HVRTGTIILG+W++
Sbjct: 11 SDRFYSTRCCGCCHVRTGTIILGTWYM 37
>AY219177-1|AAO64359.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHL 191
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY219176-1|AAO64358.1| 124|Homo sapiens lysosome-associated
protein transmembrane 4 beta protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHL 191
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>AY198226-1|AAO63563.1| 124|Homo sapiens LAPTM4B protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 135 CCFCLHVRTGTIILGSWHL 191
CC C HVRTGTI+LG W+L
Sbjct: 106 CCLCCHVRTGTILLGVWYL 124
>BC041629-1|AAH41629.1| 264|Homo sapiens MAZ protein protein.
Length = 264
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 42 HILELTLEHFTTKAMLRFHP----KLGSERGSEWLCCFC-LHVRTGTIILGSWHLFLHL 203
H+ EL + FTT A LR H L + R LC C +H +T + G H+ HL
Sbjct: 190 HVCELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAG--HMQTHL 246
>AF489858-1|AAN03800.1| 493|Homo sapiens serum amyloid A activating
factor 2 protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 42 HILELTLEHFTTKAMLRFHP----KLGSERGSEWLCCFC-LHVRTGTIILGSWHLFLHL 203
H+ EL + FTT A LR H L + R LC C +H +T + G H+ HL
Sbjct: 419 HVCELCNKGFTTAAYLRIHAVKDHGLQAPRADRILCKLCSVHCKTPAQLAG--HMQTHL 475
>BC133703-1|AAI33704.1| 1504|Homo sapiens RAPGEF6 protein protein.
Length = 1504
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -2
Query: 211 SATRCRKRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 41
SA +RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1293 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1352
Query: 40 TDYISNRSYAAE 5
+ IS E
Sbjct: 1353 NEEISQEHIIIE 1364
>AK095698-1|BAC04613.1| 242|Homo sapiens protein ( Homo sapiens
cDNA FLJ38379 fis, clone FEBRA2002986. ).
Length = 242
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 298 WGALEMYCPHHCQMW 342
WG L CP HC W
Sbjct: 174 WGRLHSQCPRHCPPW 188
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 298 WGALEMYCPHHCQMW 342
WG L CP HC W
Sbjct: 188 WGRLHSQCPRHCPPW 202
>AF478567-1|AAM21637.1| 1601|Homo sapiens PDZ domain-containing
guanine nucleotide exchange factor PDZ-GEF2 protein.
Length = 1601
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -2
Query: 211 SATRCRKRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 41
SA +RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1285 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1344
Query: 40 TDYISNRSYAAE 5
+ IS E
Sbjct: 1345 NEEISQEHIIIE 1356
>AF478468-1|AAL79915.1| 1601|Homo sapiens Rap1 guanine
nucleotide-exchange factor PDZ-GEF2A protein.
Length = 1601
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -2
Query: 211 SATRCRKRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 41
SA +RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1285 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1344
Query: 40 TDYISNRSYAAE 5
+ IS E
Sbjct: 1345 NEEISQEHIIIE 1356
>AF394782-1|AAK83368.1| 1509|Homo sapiens rap guanine nucleotide
exchange factor protein.
Length = 1509
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = -2
Query: 211 SATRCRKRCHDPRIIVPVRT--CRQKQHSHSL-PRSLPNLGWNLNIALVVKCSRVSSRIC 41
SA +RC + VP T + +H+ + S GW L ++KC VSS +
Sbjct: 1298 SAALQDERCSSQALAVPESTGALEKTEHASGIGDHSQHGPGWTLLKPSLIKCLAVSSSVS 1357
Query: 40 TDYISNRSYAAE 5
+ IS E
Sbjct: 1358 NEEISQEHIIIE 1369
>AC093642-1|AAY15000.1| 242|Homo sapiens unknown protein.
Length = 242
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 298 WGALEMYCPHHCQMW 342
WG L CP HC W
Sbjct: 174 WGRLHSQCPRHCPPW 188
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 298 WGALEMYCPHHCQMW 342
WG L CP HC W
Sbjct: 188 WGRLHSQCPRHCPPW 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,337,198
Number of Sequences: 237096
Number of extensions: 1361281
Number of successful extensions: 3495
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3495
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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