Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0031
(350 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g23590.1 68416.m02967 expressed protein 36 0.006
At4g28470.1 68417.m04073 26S proteasome regulatory subunit, puta... 29 0.87
At5g49980.1 68418.m06189 transport inhibitor response protein, p... 29 1.2
At2g09900.1 68415.m01028 hypothetical protein 29 1.2
At1g09350.1 68414.m01046 galactinol synthase, putative contains ... 29 1.2
At5g15130.1 68418.m01773 WRKY family transcription factor contai... 28 1.5
At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to... 28 2.0
At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to... 28 2.0
At1g01070.2 68414.m00008 nodulin MtN21 family protein similar to... 27 2.7
At1g01070.1 68414.m00009 nodulin MtN21 family protein similar to... 27 2.7
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 27 3.5
At1g72130.2 68414.m08338 proton-dependent oligopeptide transport... 27 3.5
At1g72130.1 68414.m08337 proton-dependent oligopeptide transport... 27 3.5
At1g19870.1 68414.m02492 calmodulin-binding family protein conta... 27 3.5
At5g28760.1 68418.m03532 hypothetical protein contains Pfam prof... 26 8.1
At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR... 26 8.1
At1g29180.1 68414.m03570 DC1 domain-containing protein contains ... 26 8.1
>At3g23590.1 68416.m02967 expressed protein
Length = 1309
Score = 36.3 bits (80), Expect = 0.006
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = -3
Query: 345 FPHLTVVWAVHLQCAPHCSTNSLGMTHG-PVHPAIEDHAQSLLKLLVPLGAGKGAMIPE* 169
FP L V + H +C +T S G+THG PVH +E +LL + G + P
Sbjct: 763 FPKLKVWYRQHQRCI--AATLS-GLTHGSPVHQTVE----ALLNMTFGKVRGSQTLNPVN 815
Query: 168 LCQSEHVGRSSIATHCHVHFPTWDGILTLPWL*NA 64
S G +S ++ FP WD + +P++ +A
Sbjct: 816 SGTSSSSGAASEDSNIRPEFPAWDILKAVPYVVDA 850
>At4g28470.1 68417.m04073 26S proteasome regulatory subunit, putative
contains Pfam domain PF01851: Proteasome/cyclosome repeat
Length = 1103
Score = 29.1 bits (62), Expect = 0.87
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 144 CLHVRTGTIILGSWHLFLHLVALGVLAAIVRDPRLLDELDRESSPVSSWSNVGRTGDVL 320
CL +++ IILG +H L+ + L + PR++ +D+ P+S VG+ DV+
Sbjct: 888 CLDMKS--IILGKYHYVLYFLVLAM------QPRMMLTVDQSLKPISVPVRVGQAVDVV 938
>At5g49980.1 68418.m06189 transport inhibitor response protein,
putative E3 ubiquitin ligase SCF complex F-box subunit;
similar to F-box containing protein TIR1 GI:13249030
from [Populus tremula x Populus tremuloides]
Length = 619
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 63 QELVPEYAPTIFPI--GRTPLNF 1
+EL+PEY P IFP+ T LNF
Sbjct: 321 RELMPEYLPAIFPVCANLTSLNF 343
>At2g09900.1 68415.m01028 hypothetical protein
Length = 175
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -3
Query: 327 VWAVHLQCA----PHCSTNSLGMTHGPVHPAIEDHAQSLL 220
V +HL C PHCST +T P+ ++D QSLL
Sbjct: 92 VECLHLHCQTTTRPHCSTWKSSITITPLDCILDDKLQSLL 131
>At1g09350.1 68414.m01046 galactinol synthase, putative contains
Pfam profile: PF01501 glycosyl transferase family 8
Length = 334
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 151 CRQKQHSHSLPRSLPNLGWNLNIALVVKCSRVSS 50
C QK+ H P++LP +L+ A V++C++ S
Sbjct: 299 CGQKEDVHRKPKTLPQFFTDLSEADVLQCAKAPS 332
>At5g15130.1 68418.m01773 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain; TMV
response-related gene product, Nicotiana tabacum,
EMBL:AB024510
Length = 548
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -2
Query: 232 TIAAKTPSATRCRKRCHDPRIIVPVRTCRQKQHSHSLPRSLPNLGWNLNIALVVKCSRVS 53
T+A P + ++ D I++ T + HSHSLP S + + A + S S
Sbjct: 253 TVAPGCPVRKQVQRCADDMSILI---TTYEGTHSHSLPLSATTMASTTSAAASMLLSGSS 309
Query: 52 SRICTDYISNRSY 14
S + I N Y
Sbjct: 310 SSPAAEMIGNNLY 322
>At4g01430.2 68417.m00184 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 305
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 51 ELTLEHFTTKAMLRFHPKLGSERGSEWLCCFCLHVRTGTIILGSWHLF 194
EL+ H +A + G ++ +WL CL++ GT++L W LF
Sbjct: 97 ELSNPHSHPQARHNNNNNNGHDQTKKWLLG-CLYLVIGTVLLSLWMLF 143
>At4g01430.1 68417.m00183 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 51 ELTLEHFTTKAMLRFHPKLGSERGSEWLCCFCLHVRTGTIILGSWHLF 194
EL+ H +A + G ++ +WL CL++ GT++L W LF
Sbjct: 157 ELSNPHSHPQARHNNNNNNGHDQTKKWLLG-CLYLVIGTVLLSLWMLF 203
>At1g01070.2 68414.m00008 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 318
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 96 HPKLGSERGSEWLCCFCLHVRTGTIILGSWHLF 194
H ++ + WL CL++ GT++L W LF
Sbjct: 131 HNNNDQDKANNWLLG-CLYLTIGTVLLSLWMLF 162
>At1g01070.1 68414.m00009 nodulin MtN21 family protein similar to
MtN21 GI:2598575 (root nodule development) from
[Medicago truncatula]
Length = 365
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 96 HPKLGSERGSEWLCCFCLHVRTGTIILGSWHLF 194
H ++ + WL CL++ GT++L W LF
Sbjct: 178 HNNNDQDKANNWLLG-CLYLTIGTVLLSLWMLF 209
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 27.1 bits (57), Expect = 3.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 275 PSEFVEQCGAHWRCTAHTTVK 337
PSE+V+ C RCT TVK
Sbjct: 171 PSEYVKTCKIGTRCTVQQTVK 191
>At1g72130.2 68414.m08338 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 420
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 189 LFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
+FL ++A+ VLAA+V RL D S P+S W
Sbjct: 275 IFLSILAM-VLAALVETKRLQAARDELSIPMSVW 307
>At1g72130.1 68414.m08337 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 538
Score = 27.1 bits (57), Expect = 3.5
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 189 LFLHLVALGVLAAIVRDPRLLDELDRESSPVSSW 290
+FL ++A+ VLAA+V RL D S P+S W
Sbjct: 393 IFLSILAM-VLAALVETKRLQAARDELSIPMSVW 425
>At1g19870.1 68414.m02492 calmodulin-binding family protein contains
Pfam profile: PF00612 IQ calmodulin-binding motif
Length = 794
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 178 PRIIVPVRTCRQKQHSHSLPRSLPNL 101
PR + P ++ + K H+ PRS P+L
Sbjct: 724 PRFMQPTQSAKAKVQEHNSPRSSPDL 749
>At5g28760.1 68418.m03532 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 520
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 275 PSEFVEQCGAHWRCTAHTTVK 337
PSE+ + C RC H TVK
Sbjct: 66 PSEYQKMCKVGTRCIVHHTVK 86
>At5g22690.1 68418.m02651 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1008
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 12 AYDLLEI*SVHILELTLEHFTTKAMLRFHPKLGSE 116
++D+ EI +HI + + LRF+ KLG +
Sbjct: 537 SFDMSEIEELHIHKRAFKRMPNLRFLRFYKKLGKQ 571
>At1g29180.1 68414.m03570 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 444
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 214 PSATRCRKRCHDPRIIVPVR 155
PS T CRKRC ++V +R
Sbjct: 413 PSCTGCRKRCPYKTVLVLIR 432
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,834,823
Number of Sequences: 28952
Number of extensions: 182256
Number of successful extensions: 463
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 439384704
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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