Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0022
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    28   0.025
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   0.94 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   2.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   6.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   8.7  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 0.025
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +2

Query: 173 GTTGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMT 304
           G   + + TL V F   +WY+ S++++ VG  A T +  P T +
Sbjct: 235 GGASASKVTLSVPFYGHSWYLQSTSNHDVGAPATTGIAGPFTQS 278


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 0.94
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 320 HTAVPLS*LVEMVALLMPVCP--RHYWLNLTYTTLRTG 213
           H  + LS  ++ VA    V    RHY++N+T+  L  G
Sbjct: 475 HLLMELSRAIDSVACSKTVSDGIRHYYVNVTFPHLFNG 512


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 7   YNII*ASLITKNVYVTQN 60
           YNI+  SL    VY+T N
Sbjct: 47  YNIVAVSLTAYMVYITTN 64


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -1

Query: 165 LFFLSESTLKQSCYHRITEDL*FNNSLLFRTIHEI--ILCNIYIF 37
           L  +S +T K  CYH I      NN     T+ +I   LC   I+
Sbjct: 12  LGIVSAATNKVVCYHGIWSTYRLNNGKF--TVEDIDPTLCTHLIY 54


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 253 CRGQTGINRATISTNYDSGTAVCS 324
           C G TG  RAT     +S   V S
Sbjct: 922 CAGSTGTRRATGCGRVESVAEVTS 945


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,223
Number of Sequences: 336
Number of extensions: 1726
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)