Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0022
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46933-2|CAA87035.1|  101|Caenorhabditis elegans Hypothetical pr...    30   0.55 
Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical pr...    27   2.9  
Z48334-8|CAE17779.1|  176|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AF040655-8|AAB95047.1|  632|Caenorhabditis elegans Hypothetical ...    26   6.7  

>Z46933-2|CAA87035.1|  101|Caenorhabditis elegans Hypothetical
           protein F34H10.2 protein.
          Length = 101

 Score = 29.9 bits (64), Expect = 0.55
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -2

Query: 251 YWLNLT----YTTLRTGSQLLVSRAWSRLYPL 168
           YW+N      Y   RT S+  VS+ W RLYPL
Sbjct: 41  YWVNRAMPNKYRKYRTYSRRSVSQRWKRLYPL 72


>Z78059-1|CAH04725.2|  348|Caenorhabditis elegans Hypothetical
           protein C34B4.5 protein.
          Length = 348

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
 Frame = -2

Query: 245 LNLTYTTLRTGSQLLVSR-AWSRLYPLRFFFYQKVL*SKVAITESLK-IFNSIIHYYSVQ 72
           L+    TL T S L+++   W+ L P++FF++   L     I  +L  +FN     +SV 
Sbjct: 50  LSTVTATLLTASFLIMAVFLWNHLKPMKFFWFLLQLTISAFILSTLNLVFNVPATLFSVA 109

Query: 71  YTR*FCVTYTFLVI 30
            T  F  T  +L++
Sbjct: 110 -TEQFVQTNLYLIM 122


>Z48334-8|CAE17779.1|  176|Caenorhabditis elegans Hypothetical
           protein F10B5.9 protein.
          Length = 176

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = -1

Query: 267 SLPTTLLAELNIYHAAHRK--PTISVSRLEPVVPIALFFLSESTLKQSCYHRITEDL*FN 94
           S   T + +L + H    +  PT+ +S L   V I   + S S    S +   T ++  N
Sbjct: 57  SFTATFVFQLGLIHIVIFQFLPTVIISILYTFVSIGYHYASLS----STWEDRTVNIFMN 112

Query: 93  NSLL-FRTIHEIILCNIYIFGNQACL 19
             LL F  IH+I+ C  Y +  +  L
Sbjct: 113 GPLLLFFIIHKIVSCVFYAYYKRTAL 138


>AF040655-8|AAB95047.1|  632|Caenorhabditis elegans Hypothetical
           protein T24E12.10 protein.
          Length = 632

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 297 VSGNGSSVNASLPTTLLAELNIYHAAHRKPTISVS 193
           V+ + SS   S P  ++ E+  +HAAH+ P +SV+
Sbjct: 376 VAESFSSATTSEPQEIV-EIQEHHAAHQLPAVSVA 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,938,146
Number of Sequences: 27780
Number of extensions: 148455
Number of successful extensions: 372
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)