Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0022
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   2.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   2.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   4.4  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 300 IVSGNGSSVNASL 262
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 300 IVSGNGSSVNASL 262
           IV GNG SVN  L
Sbjct: 364 IVQGNGDSVNVQL 376


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 4.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 75  YGIIMNY*IKDLQ*FCDSNFALEYFL 152
           Y +  NY  K+++ + D  + L+YF+
Sbjct: 200 YIVNTNYSSKNMREYNDPEYKLDYFM 225


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,966
Number of Sequences: 438
Number of extensions: 1895
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)