Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0018
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 133 1e-31
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 122 2e-28
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 121 4e-28
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 97 8e-21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 92 4e-19
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 92 4e-19
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 92 4e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 89 2e-18
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 79 2e-15
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 74 9e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 74 9e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 74 9e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 74 1e-13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 74 1e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 70 1e-12
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 70 1e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 70 2e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 69 3e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 69 3e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 69 3e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 63 2e-10
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 63 2e-10
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 60 2e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 58 6e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 58 8e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 56 3e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 56 3e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 56 3e-08
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 55 6e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 52 5e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 48 9e-06
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 48 9e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 40 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.12
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.20
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 33 0.27
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.35
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.62
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.82
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.1
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.1
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 29 3.3
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 29 3.3
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 29 4.4
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 5.8
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 7.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 153 bits (371), Expect = 1e-37
Identities = 70/161 (43%), Positives = 110/161 (68%)
Frame = +2
Query: 233 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN 412
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 413 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 592
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 593 PIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 715
+RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++ TC+
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCL 236
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 133 bits (321), Expect = 1e-31
Identities = 60/156 (38%), Positives = 95/156 (60%)
Frame = +2
Query: 245 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 424
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 425 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 604
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 605 GDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 712
G+GP+A+++ PTRELA Q+ Q A F + C
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPIC 371
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 122 bits (295), Expect = 2e-28
Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +2
Query: 233 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEA 409
+ + D V + F KNFY + + + EV+ YR + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 410 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 589
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 590 PPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTC 712
P + GDGPIA++LAPTRELA Q + A F ++ C
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVAC 410
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 121 bits (292), Expect = 4e-28
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 4/130 (3%)
Frame = +2
Query: 338 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 517
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 518 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 685
GVA+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 686 HTSYVRNTCV 715
++ V
Sbjct: 403 KLLGIKTVSV 412
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 97.5 bits (232), Expect = 8e-21
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 14/165 (8%)
Frame = +2
Query: 263 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 421
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 422 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ-PP 595
G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQ 152
Query: 596 IRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 715
+ D P LVL+PTRELAQQI+ + + Y ++ C+
Sbjct: 153 YEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCL 196
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Frame = +2
Query: 347 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 526
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 527 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVAA 676
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 184 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 243
Query: 677 DFGHTSYVR 703
F + S ++
Sbjct: 244 KFSYKSNIQ 252
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Frame = +2
Query: 347 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 526
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 527 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVAA 676
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 168 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 227
Query: 677 DFGHTSYVR 703
F + S ++
Sbjct: 228 KFSYKSNIQ 236
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 91.9 bits (218), Expect = 4e-19
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Frame = +2
Query: 347 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 526
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 527 QTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQIQQVAA 676
QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 165 QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEAT 224
Query: 677 DFGHTSYVR 703
F + S ++
Sbjct: 225 KFSYKSNIQ 233
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +2
Query: 293 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 469
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 470 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 640
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 641 RELAQQI 661
RELA+QI
Sbjct: 276 RELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Frame = +2
Query: 356 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 535
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 536 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAADF 682
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 683 GH 688
+
Sbjct: 274 AY 275
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 74.1 bits (174), Expect = 9e-14
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 565
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 566 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 688
+ + + + G+G P ++L PTRELA QI F +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 74.1 bits (174), Expect = 9e-14
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 565
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 566 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 688
+ + + + G+G P ++L PTRELA QI F +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 74.1 bits (174), Expect = 9e-14
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 565
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 566 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 688
+ + + + G+G P ++L PTRELA QI F +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 565
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 566 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 694
+ + + + G +G P ++L PTRELA QI F + S
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 565
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 566 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTS 694
+ + + + G +G P ++L PTRELA QI F + S
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQS 402
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/112 (32%), Positives = 63/112 (56%)
Frame = +2
Query: 380 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 559
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 560 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 715
+P + + R G AL+++PTRELA Q +V + G + +R C+
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACL 127
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 70.1 bits (164), Expect = 1e-12
Identities = 36/112 (32%), Positives = 63/112 (56%)
Frame = +2
Query: 380 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 559
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 560 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 715
+P + + R G AL+++PTRELA Q +V + G + +R C+
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACL 127
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/91 (39%), Positives = 53/91 (58%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 578 INNQPPIRRGDGPIALVLAPTRELAQQIQQV 670
+ +P + LVL PTRELA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 578 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 688
+ ++ + G+G P ++L PTREL QI F +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 578 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 688
+ ++ + G+G P ++L PTREL QI F +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 578 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 688
+ ++ + G+G P ++L PTREL QI F +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/90 (37%), Positives = 53/90 (58%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 578 INNQPPIRRGDGPIALVLAPTRELAQQIQQ 667
++ P G AL+L PTRELA QI +
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/90 (37%), Positives = 53/90 (58%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 578 INNQPPIRRGDGPIALVLAPTRELAQQIQQ 667
++ P G AL+L PTRELA QI +
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAE 175
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/99 (32%), Positives = 61/99 (61%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 568
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 569 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 685
+ I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/99 (32%), Positives = 61/99 (61%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 568
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 569 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 685
+ I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Frame = +2
Query: 416 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 580
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 581 --NNQPPIRRGDGPIALVLAPTRELAQQIQQ 667
+ + GP AL++APTREL QI +
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 578 INNQPPIRRGDGPIALVLAPTRELAQQIQQ 667
+ + P LVL PTRELA QI Q
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Frame = +2
Query: 383 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 562
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 563 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR-NTCV 715
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ + C+
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACI 129
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Frame = +2
Query: 425 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 589
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 590 PPIRRGDGPIALVLAPTRELAQQIQQ 667
R+ DGP+AL+LAPTRELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 58.4 bits (135), Expect = 5e-09
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Frame = +2
Query: 305 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 484
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 485 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTREL 649
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 650 AQQ 658
A Q
Sbjct: 217 AAQ 219
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/92 (29%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 578 INNQPPIRRGD-GPIALVLAPTRELAQQIQQV 670
+ + G GP A+++APT+EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 568
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 569 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR-NTCV 715
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ + C+
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACI 129
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/82 (36%), Positives = 51/82 (62%)
Frame = +2
Query: 434 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 613
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 614 PIALVLAPTRELAQQIQQVAAD 679
A+V+ PTRELA Q Q+ +
Sbjct: 114 --AMVIVPTRELALQTSQICVE 133
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/83 (34%), Positives = 54/83 (65%)
Frame = +2
Query: 431 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 610
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 611 GPIALVLAPTRELAQQIQQVAAD 679
G ++++PTREL+ Q V ++
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSE 162
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 416 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 580
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 581 NNQPPIRRGDGPIALVLAPTRELAQQ 658
++ P L++APTREL Q
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 55.6 bits (128), Expect = 3e-08
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Frame = +2
Query: 416 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI----- 580
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFE 803
Query: 581 NNQPPIRRGDGPIALVLAPTRELAQQ 658
++ P L++APTREL Q
Sbjct: 804 KDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = +2
Query: 431 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 610
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 611 GPIALVLAPTRELAQQ 658
G AL+++PTRELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Frame = +2
Query: 452 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 610
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 611 GPIALVLAPTRELAQQIQQ 667
GP AL++APTREL QI +
Sbjct: 68 GPRALIVAPTRELVIQIMK 86
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 562
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 563 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 685
+ I+ P + LAPT ELA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 562
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 563 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 685
+ I+ P + LAPT ELA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 562
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 563 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 685
+ I+ P + LAPT ELA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/90 (25%), Positives = 52/90 (57%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 578 INNQPPIRRGDGPIALVLAPTRELAQQIQQ 667
+++ R +++ PTRE++ QI++
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKE 108
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/90 (25%), Positives = 52/90 (57%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 577
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 578 INNQPPIRRGDGPIALVLAPTRELAQQIQQ 667
+++ R +++ PTRE++ QI++
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKE 108
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 46.0 bits (104), Expect = 3e-05
Identities = 33/98 (33%), Positives = 50/98 (51%)
Frame = +2
Query: 389 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 568
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 569 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 682
+ I N G AL+L+P+REL QI V F
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/95 (25%), Positives = 47/95 (49%)
Frame = +2
Query: 431 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 610
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 611 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 715
++LAP R +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 565
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2
Query: 494 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 589
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +2
Query: 488 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 661
P + +++ A TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 506 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 661
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 449 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 625
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 626 VLAPTRELAQQI 661
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 470 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 637
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 638 TRELAQQI 661
T L Q+
Sbjct: 79 TSALVDQL 86
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 470 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 571
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 99 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 215
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 467 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 574
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 467 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 574
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -1
Query: 541 AGTRLSYAN*ILS---RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLN 371
+G L AN IL R +YR N + + + Y + +I + F + + ++NLN
Sbjct: 13 SGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLN 72
Query: 370 ATYSYLVIISVLFD 329
T +L I+++F+
Sbjct: 73 VTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -1
Query: 541 AGTRLSYAN*ILS---RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLN 371
+G L AN IL R +YR N + + + Y + +I + F + + ++NLN
Sbjct: 13 SGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLN 72
Query: 370 ATYSYLVIISVLFD 329
T +L I+++F+
Sbjct: 73 VTNEWLNKIAIIFN 86
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 530 TGSGKTLAYILPAIVH 577
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 491 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAP-TRELAQQIQQ 667
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + L QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAAS 360
Query: 668 VAADFGHTSYVR 703
+++ H + +
Sbjct: 361 ISSYLDHVYHTQ 372
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 491 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAP-TRELAQQIQQ 667
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + L QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAAS 360
Query: 668 VAADFGHTSYVR 703
+++ H + +
Sbjct: 361 ISSYLDHVYHTQ 372
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 28.7 bits (61), Expect = 4.4
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = +2
Query: 449 GYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 625
GYK IQ++ A+ K +L+ A TG+GKT +L + I N DG + L
Sbjct: 273 GYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNH---LAEDGSVKL 329
Query: 626 ------VLAPTRELAQQI 661
+APT+ L Q++
Sbjct: 330 EEFKIVYIAPTKSLVQEM 347
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 151 RIIAEFVASSKFGTTVSTAIIPV 83
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 151 RIIAEFVASSKFGTTVSTAIIPV 83
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -1
Query: 502 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 323
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 322 W*SFENCRMWIIKVF 278
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -3
Query: 227 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 126
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,394,640
Number of Sequences: 27780
Number of extensions: 325382
Number of successful extensions: 1024
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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