Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0008
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 51 6e-07
03_06_0556 + 34699994-34700017,34700116-34700229,34700350-34700622 45 4e-05
02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978 44 7e-05
01_06_0154 - 27049218-27049517,27049679-27050107 44 1e-04
03_01_0316 + 2487917-2488003,2488104-2488676 43 2e-04
04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859 42 4e-04
05_06_0110 + 25632514-25632834,25633200-25634039 42 5e-04
05_07_0153 - 28051496-28051801,28051933-28052271 41 7e-04
01_06_0683 - 31173763-31174635,31175146-31175436 40 0.002
02_05_1145 + 34429060-34429401,34430053-34430967 40 0.002
03_01_0217 - 1712979-1713794 39 0.003
12_02_1180 + 26727171-26727239,26728782-26729642 38 0.008
10_08_0898 + 21424379-21424792,21424974-21425723 37 0.011
06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818 37 0.011
02_02_0094 - 6705094-6705564,6705759-6706139,6706287-6706496 37 0.011
12_01_0442 + 3495333-3496484 37 0.015
11_01_0560 - 4413174-4414469 36 0.034
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 36 0.034
05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107 35 0.045
06_03_0576 - 22443668-22444146,22446239-22446393,22447251-224473... 32 0.42
01_06_0372 + 28828552-28829913 31 0.96
11_06_0227 + 21475954-21476771,21477215-21479144,21479292-214794... 29 2.2
11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020... 29 2.9
02_01_0371 + 2664488-2664862,2664973-2665059,2665155-2665267,266... 29 2.9
12_02_0895 + 24094809-24094886,24097197-24097402,24097493-24097919 29 3.9
06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397 29 3.9
04_04_0617 - 26642602-26642637,26643307-26643565,26644610-266447... 29 3.9
04_04_0049 - 22356139-22357649,22357764-22357995 29 3.9
03_05_0713 - 27070063-27070126,27070202-27070290,27070369-270704... 29 3.9
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 28 5.1
09_06_0078 + 20727684-20728036,20728871-20728895,20729218-207293... 28 6.8
09_01_0037 - 604001-604957 28 6.8
06_03_1267 - 28851286-28851306,28851452-28851520,28852031-288520... 28 6.8
05_07_0238 + 28597399-28598286 28 6.8
03_01_0576 + 4255153-4255238,4256051-4256153,4256235-4256556,425... 28 6.8
05_07_0002 - 26979873-26980823 27 8.9
04_04_1618 + 34822644-34822915,34823008-34823369,34824721-348247... 27 8.9
04_04_1377 - 33064906-33065607 27 8.9
04_03_0505 + 16628145-16628217,16628612-16628767,16628964-166291... 27 8.9
02_05_0781 + 31715100-31715672 27 8.9
>10_08_0267 - 16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 51.2 bits (117), Expect = 6e-07
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Frame = +1
Query: 76 RPLKQPRRLVRQRHAALAAPPHDMGAK-RPGTMCTNCQTTATSLWRRNVQGET-VCNACG 249
R ++ PRRL Q +A A H + A R G C +C TT T WR +CNACG
Sbjct: 744 RVVQLPRRL--QEPSASANLAHAVAATARAGRECAHCGTTKTPAWRLGPDSRRKLCNACG 801
Query: 250 LYFKLHNVNRPLTMKKDSIQTRKRKPKNSNIKADRSAKAVQRAVSAG 390
++ +N T ++S Q +K+K K+S +R AV V G
Sbjct: 802 NKYRSGQLN-STTFSQNS-QEQKKKSKSSACSRERKRSAVAATVVVG 846
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 151 AKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
A G C +C TT T WR +G T+CNAC + ++
Sbjct: 596 AAAKGLQCRHCGTTETPQWRHGPEGHRTLCNACSMRYR 633
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 79 PLKQPRRLVRQRHAALAAPPHDMGAKRPGTMCTNCQTTATSLWRRNVQGE-TVCNACGLY 255
P + RR+V + A + AK CT+C TT T W +CNACG
Sbjct: 965 PATKHRRIVDLLRCSTAL---NTAAKAVERRCTHCGTTKTPAWLSGPDSRGKLCNACGKQ 1021
Query: 256 FK 261
++
Sbjct: 1022 YR 1023
>03_06_0556 + 34699994-34700017,34700116-34700229,34700350-34700622
Length = 136
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 136 PHDMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFKLHNVNRPLTMKKDSIQT 312
P + A CT+C TT T LWR G +++CNACG+ ++ R + D+ +
Sbjct: 15 PDERTASGEPKACTDCHTTKTPLWRGGPSGPKSLCNACGIRYR---KKRREALGLDAGEG 71
Query: 313 RKRKPKNSNIKADRSAKAVQRAVSAGIKMESILESARR 426
+ + K +R + G E +L+ RR
Sbjct: 72 GAERQEKKKSKRERGEEVTMELRMVGFGKEVVLKQRRR 109
>02_05_0121 + 26015578-26015613,26015734-26016066,26016184-26016978
Length = 387
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 64 NGMNRPLKQPRRLVRQRHAALAAPPHDMGAKRPGT---MCTNCQTTATSLWRRNVQG-ET 231
NG +P K+ R+ Q+ LAA GA P T C++C T WR +G +T
Sbjct: 268 NGKQKPKKRGRKPKHQQPPHLAAAAGG-GAALPATGDRRCSHCGVQKTPQWRAGPEGAKT 326
Query: 232 VCNACGLYFK 261
+CNACG+ +K
Sbjct: 327 LCNACGVRYK 336
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = +1
Query: 172 CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
C NC TT+T LWR +G +++CNACG+ +K
Sbjct: 124 CANCDTTSTPLWRNGPRGPKSLCNACGIRYK 154
>03_01_0316 + 2487917-2488003,2488104-2488676
Length = 219
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 100 LVRQRHAALAAPPHDMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
L R R AA AA D GA P CT+C T WR G T+CNACG+ FK
Sbjct: 104 LSRPRQAAAAAA--DAGA--PRRRCTHCAVDETPQWRLGPDGPRTLCNACGVRFK 154
>04_04_0655 + 26974366-26974398,26974480-26974899,26975023-26975859
Length = 429
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +1
Query: 64 NGMNRPLKQPRRLVRQRHAALAAPPHDMGAKR----PGTM-CTNCQTTATSLWRRNVQG- 225
NG N+P K+ R+ + PPH GA PG C++C T WR +G
Sbjct: 310 NGKNKPKKRGRKPKQ-------LPPHPSGAAASAPAPGDRRCSHCGVQKTPQWRAGPEGA 362
Query: 226 ETVCNACGLYFK 261
+T+CNACG+ +K
Sbjct: 363 KTLCNACGVRYK 374
>05_06_0110 + 25632514-25632834,25633200-25634039
Length = 386
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 79 PLKQPRRLVRQRHAALAAPPHDMGAKRP--GTMCTNCQTTATSLWRRNVQG-ETVCNACG 249
P K+ + +++ AP + A+ G C +C+T T WR G +T+CNACG
Sbjct: 222 PAKKAAKSAKKKDGPSPAPAPNAAAQAAAEGRRCLHCETDKTPQWRTGPMGPKTLCNACG 281
Query: 250 LYFK 261
+ +K
Sbjct: 282 VRYK 285
>05_07_0153 - 28051496-28051801,28051933-28052271
Length = 214
Score = 41.1 bits (92), Expect = 7e-04
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 172 CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
C NC T +T LWR +G +++CNACG+ +K
Sbjct: 94 CANCDTMSTPLWRNGPRGPKSLCNACGIRYK 124
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +1
Query: 73 NRPLKQPRRLVRQRHAALAAPPHDMGAKRP------GTMCTNCQTTATSLWRRNVQG-ET 231
++P K+ A L++ P G P G C +C+T T WR G +T
Sbjct: 225 SKPAKKKDAPAPPAQAQLSSVPVHSGGSAPAAAAGEGRRCLHCETDKTPQWRTGPMGPKT 284
Query: 232 VCNACGLYFK 261
+CNACG+ +K
Sbjct: 285 LCNACGVRYK 294
>02_05_1145 + 34429060-34429401,34430053-34430967
Length = 418
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 160 PGTM--CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
PGT+ CT+CQ T WR G +T+CNACG+ +K
Sbjct: 329 PGTVRRCTHCQIEKTPQWRAGPLGPKTLCNACGVRYK 365
>03_01_0217 - 1712979-1713794
Length = 271
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 172 CTNCQTTATSLWRRNVQG-ETVCNACGLYFKLHNV 273
C +CQTT T WR G T+CNACG+ +++ ++
Sbjct: 188 CGHCQTTETPQWRVGPDGPSTLCNACGIRYRIDHL 222
>12_02_1180 + 26727171-26727239,26728782-26729642
Length = 309
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 151 AKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
++ P CT+C + T WR G +T+CNACG+ FK
Sbjct: 232 SEEPMKRCTHCLSYKTPQWRTGPLGPKTLCNACGVRFK 269
>10_08_0898 + 21424379-21424792,21424974-21425723
Length = 387
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 DMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
++G + CT+C + T WR G +T+CNACG+ FK
Sbjct: 268 EVGMEAGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFK 308
>06_03_0530 + 21807464-21807685,21807809-21808207,21808312-21808818
Length = 375
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 169 MCTNCQTTATSLWRRNVQG-ETVCNACGL 252
+C++C TT T LWR G +++CNACG+
Sbjct: 187 VCSDCNTTKTPLWRSGPCGPKSLCNACGI 215
>02_02_0094 - 6705094-6705564,6705759-6706139,6706287-6706496
Length = 353
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 169 MCTNCQTTATSLWRRNVQG-ETVCNACGL 252
+C++C TT T LWR G +++CNACG+
Sbjct: 177 VCSDCNTTKTPLWRSGPCGPKSLCNACGI 205
>12_01_0442 + 3495333-3496484
Length = 383
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Frame = +1
Query: 79 PLKQPRRLVRQRHAALAAPPHDMGAKRPGTM-------CTNCQTTATSLWRRNVQG-ETV 234
P+K+ + R PP D G + G C NC T WR G T+
Sbjct: 82 PVKEEEGVARVVVVVAPPPPVDPGEEEAGKRAAKRARRCLNCDAVETPQWRSGPMGRSTL 141
Query: 235 CNACGL 252
CNACG+
Sbjct: 142 CNACGV 147
Score = 35.1 bits (77), Expect = 0.045
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +1
Query: 151 AKRPGTM--CTNCQTTATSLWRRNVQGE-TVCNACGLYFK 261
AK+P C +C +T T WR G T+CNACG+ ++
Sbjct: 239 AKKPKRKRSCVHCGSTETPQWREGPTGRGTLCNACGVRYR 278
>11_01_0560 - 4413174-4414469
Length = 431
Score = 35.5 bits (78), Expect = 0.034
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 157 RPGTMCTNCQTTATSLWRRNVQGE-TVCNACGLYFKL 264
R C++C T+ T WR G T+CNACG+ K+
Sbjct: 358 RKDRRCSHCGTSETPQWRMGPDGPGTLCNACGIRSKM 394
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 35.5 bits (78), Expect = 0.034
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 172 CTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
C C+ T T +WR G ++CNACG+ ++
Sbjct: 670 CVECRATTTPMWRSGPTGPRSLCNACGIRYR 700
>05_01_0404 - 3185603-3185920,3186877-3186993,3187087-3187107
Length = 151
Score = 35.1 bits (77), Expect = 0.045
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 118 AALAAPPHDMGAKRPGTMCTNCQTTATSLWRRNVQG-ETVCNACGLYFK 261
AA AA + G + C C T T +WR G ++CNACG+ ++
Sbjct: 13 AAAAAAAEEAGRR----CCVECGATTTPMWRGGPTGPRSLCNACGIRYR 57
>06_03_0576 -
22443668-22444146,22446239-22446393,22447251-22447331,
22448475-22448618,22449670-22449695,22449748-22449811,
22449905-22449996,22450550-22450780,22451238-22451678,
22451754-22452293
Length = 750
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Frame = -3
Query: 193 PWSGSWCTSCPVFW------RPYHVEAQRVRRGAD 107
PW W +C +FW R H++A+R RRG D
Sbjct: 566 PWGIDWNQACQIFWAKFFSRRARHLKARRQRRGND 600
>01_06_0372 + 28828552-28829913
Length = 453
Score = 30.7 bits (66), Expect = 0.96
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 596 GVGREAQLASDTAEWSWCGA-ALCGPSSGTPMYMTWCCGSSSFMPSADCT 450
G+ EA SD W+ CGA A C P G+P Y S++F+ D T
Sbjct: 104 GLSGEADTGSDLI-WTKCGACARCSP-RGSPSYYPTSSSSAAFVACGDRT 151
>11_06_0227 +
21475954-21476771,21477215-21479144,21479292-21479426,
21480287-21480392,21480560-21480576
Length = 1001
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -1
Query: 231 RLALHVAAPQGRRRGLAVGAHRARSFGA 148
R+ALH + QG+ LAVG + RSF A
Sbjct: 533 RIALHESWNQGKNNDLAVGMTQLRSFNA 560
>11_06_0228 +
21497248-21498143,21499831-21501700,21501934-21502038,
21502139-21502232,21502335-21502363
Length = 997
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 231 RLALHVAAPQGRRRGLAVGAHRARSFGA 148
R+ALH + QG+ LAVG RSF A
Sbjct: 559 RIALHKSWNQGKNNDLAVGMTHLRSFNA 586
>02_01_0371 +
2664488-2664862,2664973-2665059,2665155-2665267,
2665506-2665634,2666688-2666793,2667296-2667367,
2667702-2667806
Length = 328
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Frame = +1
Query: 172 CTNCQTTATS--LWRRNVQG-ETVCNACGLYFKLHNVNRPLT----MKKDSIQTRKRKPK 330
C +C +A S + RR G T+CNACGL + R +T + + +
Sbjct: 236 CHHCGISAASTPMMRRGPDGPRTLCNACGLMWANKGTMREVTKGPPVPLQIVPAATNDVQ 295
Query: 331 NSNIKA---DRSAKAVQRAVSAGIKMES 405
N ++A ++ AV+ AVSA ES
Sbjct: 296 NGIVEATGVEQHNSAVEEAVSAANGHES 323
>12_02_0895 + 24094809-24094886,24097197-24097402,24097493-24097919
Length = 236
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 186 DHGDVPVAPQRAGRDGLQRVRPLLQAAQRQPTSHHEEGLH 305
DHG +P + Q+A LQR+ + + +RQ TS E +H
Sbjct: 67 DHGRLPDSVQQARERLLQRLNSVDLSGRRQNTSLSSETIH 106
>06_02_0034 - 10800691-10802215,10802294-10802828,10802902-10803397
Length = 851
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = -1
Query: 369 YCLSASVSLNITVLWFPFSRLNGVLLHGERSVDVVQLEVEAARVADRLALHVAAPQGRRR 190
YC + + +L+I V+ F +LH + + + L + AA V D L+L A G R
Sbjct: 71 YCNATAFALSIVVIILIFIL---AILHEKGKLQIPMLPLRAAMVLDLLSLIGAYAAGTSR 127
Query: 189 GL 184
G+
Sbjct: 128 GV 129
>04_04_0617 -
26642602-26642637,26643307-26643565,26644610-26644796,
26644981-26645044
Length = 181
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Frame = -3
Query: 247 RTRCRPSRPARC----GATGTSPWSGSWCTSC 164
R CRP PARC G G+S W+G C
Sbjct: 126 RYTCRPLHPARCPFGPGPGGSSRWTGRMRYQC 157
>04_04_0049 - 22356139-22357649,22357764-22357995
Length = 580
Score = 28.7 bits (61), Expect = 3.9
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Frame = +1
Query: 130 APPHDM---GAKRPGTMCTNCQTT-ATSLWRR---NVQGETVCNACGLYFKLHNVNRPLT 288
A PHD G P T+C + SL+RR +V + +A Y LH + P T
Sbjct: 91 AQPHDRLLGGLLSPDFNDTSCLSRYRASLYRRRSLHVLSSHLVSALRRYESLHRLCGPGT 150
Query: 289 MKKDSIQTRKRKPKNSNIKAD 351
+ R R P +SN +D
Sbjct: 151 SAYERAVARLRSPSSSNTTSD 171
>03_05_0713 -
27070063-27070126,27070202-27070290,27070369-27070428,
27071110-27071215,27071309-27071428,27072340-27072476,
27072561-27072647,27073660-27073956
Length = 319
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 172 CTNCQTTA--TSLWRRNVQG-ETVCNACGL 252
C NC T+ T RR G T+CNACGL
Sbjct: 215 CQNCGTSEKMTPAMRRGPAGPRTLCNACGL 244
>03_03_0008 -
13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 160 PGTMCTNCQTTATSLWRRNVQGETVCN-ACGLYFKLHNVNRPLTMKKDSIQTRKRKPKNS 336
PGT N + T+ ET N A FK H+ + + MKK I RKRKP +
Sbjct: 244 PGTSNNNKKLNYTTKVDSTCDSETSQNGALETQFKSHDASS-IPMKKSVIFKRKRKPSRN 302
>09_06_0078 +
20727684-20728036,20728871-20728895,20729218-20729347,
20729441-20729571,20729654-20729742,20730127-20730203,
20730279-20730412
Length = 312
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 166 TMCTNCQTTATSLWRRNVQGETVCNACGLYFKLHNVN 276
+ C +C+ + + G+TVC CGL + H+V+
Sbjct: 4 SFCPDCKKHTEVAFDHSA-GDTVCTECGLVLEAHSVD 39
>09_01_0037 - 604001-604957
Length = 318
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +1
Query: 457 SAEGMKLEEPQHHVMYIGVPELGPHKAAPHHDHSAVSLAS*ASRPTP 597
S G L + HH + +P PH P H + V+ A P P
Sbjct: 148 SPSGSDLSDSSHHSLPSQMPSSPPHLLLPQHVYRPVARAGGVVVPPP 194
>06_03_1267 -
28851286-28851306,28851452-28851520,28852031-28852066,
28852381-28852486,28852869-28852997,28853685-28853797,
28853907-28853993,28854106-28854543
Length = 332
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 172 CTNC--QTTATSLWRRNVQG-ETVCNACGL 252
C +C AT + RR G T+CNACGL
Sbjct: 257 CHHCGINAKATPMMRRGPDGPRTLCNACGL 286
>05_07_0238 + 28597399-28598286
Length = 295
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 172 CTNCQTTATSLWRRNVQGETV 234
C NC T +T LWR +G V
Sbjct: 130 CANCGTASTPLWRNGPRGPKV 150
>03_01_0576 +
4255153-4255238,4256051-4256153,4256235-4256556,
4257451-4257823,4257857-4258103,4258189-4258248,
4258767-4258836,4259299-4259357,4259855-4259944
Length = 469
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 166 TMCTNC--QTTATSLWRRNVQGE-TVCNACGL 252
T C C AT RR +G T+CNACG+
Sbjct: 28 TRCLRCGISANATPHMRRGPEGRRTLCNACGI 59
>05_07_0002 - 26979873-26980823
Length = 316
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 139 HDMGAKRPGTMCTNCQTTATSLWRRNVQGETVCNACGL 252
HD A G C +C+ AT++ + G+T+C C L
Sbjct: 2 HDAAAN-DGAYCPDCRR-ATAVVLDHTTGDTICTECAL 37
>04_04_1618 +
34822644-34822915,34823008-34823369,34824721-34824796,
34824887-34824980,34825086-34825223
Length = 313
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 165 HDVHQLPDHGDVPVAPQRAGRDGLQRVRPLLQAAQRQPTSHHEEGLHS-DEKTETKE 332
HD H D+ + V+ D R + ++ + QR PT+ +G HS D+ T E
Sbjct: 167 HDQHIGTDNCNFSVSVCTVFVDASPRFKHVICSPQRHPTTRRRKGEHSADDDTSCAE 223
>04_04_1377 - 33064906-33065607
Length = 233
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +1
Query: 382 SAGIKMESILESARRSPPRLGYYVQSAEGMKLEEPQHHVMYIGVPELGPHKAAPHHDH 555
+A I+ ++I +R + G V + + HH + P L PH HH H
Sbjct: 146 AASIRKKAIEVGSRVDALQTGMMVAPTTHHRERQKHHHHHHHHHPHLQPHGEEQHHHH 203
>04_03_0505 +
16628145-16628217,16628612-16628767,16628964-16629125,
16629699-16629842,16629952-16630028,16630710-16630874,
16630988-16631341
Length = 376
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 381 DGSLYCLSASVSLNITVLWFPFSRLNGVLLHGERSVDVVQLEV 253
D + Y LSA ++ ++TV P L+ + H E VD+V +V
Sbjct: 11 DSTSYMLSAELNFSVTVFTSPIKALDFLQNHAE-GVDLVLADV 52
>02_05_0781 + 31715100-31715672
Length = 190
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +1
Query: 88 QPRRLVRQRHAALAAPPHDMGAKRPGTMCTNCQTTATSLWRRNVQGETVCNACGLY 255
QP+R ++RHA AAPP A T T S +R VQ T A ++
Sbjct: 56 QPQRAAKKRHA--AAPPPRPSASTSRRSSTTVVATDVSSFRSMVQELTGFPAAAIF 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,006
Number of Sequences: 37544
Number of extensions: 303884
Number of successful extensions: 1295
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -