Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0007
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    26   0.70 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.5  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = +1

Query: 178 LAYIHSQQLVHMDVKPGNIFICSGDVDACRESDDGYDDEEPAPNHKYKIGDLGHV 342
           L Y H   ++H DV+P    + + D ++      G+      PN +  +   G V
Sbjct: 108 LRYCHENDIIHRDVRPACALLATAD-NSAPVKLGGFGSAVQLPNGRDSVETHGRV 161


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 175  GLAYIHSQQLVHMDVKPGNIFI 240
            G+AY+  ++LVH D+   N+ +
Sbjct: 946  GMAYLEERRLVHRDLAARNVLV 967


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 418 TITGTENYQICQTCPESSMISSRAW 492
           T  G    ++   CP+ SM+  R W
Sbjct: 617 TTDGPVTRRVSAGCPQGSMLGPRLW 641


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,909
Number of Sequences: 2352
Number of extensions: 9667
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)