Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0006
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 34 0.11
10_08_0782 + 20517103-20519601 34 0.14
10_08_0410 - 17716370-17716743,17716839-17716939,17717104-177173... 33 0.24
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 33 0.24
01_07_0279 + 42449197-42449310,42449398-42449835 32 0.43
02_03_0378 + 18327622-18329826 32 0.56
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 31 1.3
03_05_0941 + 29008322-29009686,29009929-29010012,29010889-290110... 31 1.3
09_04_0377 + 17086775-17088310 30 1.7
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937... 30 1.7
09_03_0161 - 12921692-12921880,12922664-12922739,12923045-129231... 29 3.0
02_05_0542 + 29868988-29869062,29869357-29869788,29869920-298701... 29 4.0
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 4.0
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879 29 5.2
04_04_1212 - 31786063-31786195,31786275-31786398,31786486-317865... 29 5.2
04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258... 28 6.9
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 28 9.2
04_04_0225 + 23745404-23747788 28 9.2
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Frame = +2
Query: 362 IDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKN 541
+D GI D +++ P EI E+ ++ H+SD + +LK ++ +N
Sbjct: 717 VDVGITTDITESLELTPPSEIYSENQDSPSRLHFSDPE----ICDLKNSTKVLEYNSSRN 772
Query: 542 REKHEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDENSADF 721
+ +G +N CG S + D ++K+ E Y DE V + E+ +
Sbjct: 773 LLDKGIILSGQLENECGLNS-VQNDEISLVKENAEKMYG-HDEISVYRQNEILHSSEQLL 830
Query: 722 -DDLPNLK 742
D+L ++K
Sbjct: 831 QDELTHIK 838
>10_08_0782 + 20517103-20519601
Length = 832
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 308 GKPKTPILPPKTCEQSLRIDEGIPVDEVVKIKVETPKEI 424
G P T ++P K + L D G+P EVV VET KE+
Sbjct: 335 GDPVTSLIPRKLADDELSGDVGLPEYEVVDKGVETVKEV 373
>10_08_0410 -
17716370-17716743,17716839-17716939,17717104-17717300,
17717392-17717677,17717768-17718004,17718226-17718281,
17720042-17721226
Length = 811
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 305 LGKPKTPILPPKTCEQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYS 466
L P P PP E + + +E +PVD+VV+ + P+ + ++ E+ +Y+
Sbjct: 29 LAAPPPPPPPPAETELTEQREEEVPVDDVVEAAADVPRREEGLVVDGGEDVYYA 82
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 33.1 bits (72), Expect = 0.24
Identities = 23/79 (29%), Positives = 40/79 (50%)
Frame = +2
Query: 347 EQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDV 526
E ++ +EGIP++ V +ET + I ED E + H ++ L +K D +
Sbjct: 3740 ENTVFTEEGIPMENVSLKTIETGEIIMSEDKEDNKVGHVEPSGNEAGL----IEKEDANG 3795
Query: 527 IRLKNREKHEVKSNGMKKN 583
I KN E +++SN +K+
Sbjct: 3796 IEFKNVES-DIRSNADQKD 3813
>01_07_0279 + 42449197-42449310,42449398-42449835
Length = 183
Score = 32.3 bits (70), Expect = 0.43
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 389 VVKIKVETPKEIKQEDIEAEENYHYSDDSDD 481
VV+ KV+ P+ ++Q +E +E SDD+DD
Sbjct: 45 VVETKVQVPEIVEQNVVERDERLRTSDDNDD 75
>02_03_0378 + 18327622-18329826
Length = 734
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 536 KNREKHEVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDENSA 715
KN H+VK NG+ ++ +K ++ ++ P N +++ VPV +V D +
Sbjct: 442 KNHVDHDVKGNGILPHNPSHKFKICNSKGADVEN-PATDENNLEQKRVPVSIDVPDPDFY 500
Query: 716 DFD 724
DFD
Sbjct: 501 DFD 503
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 554 EVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDENSADFDDLP 733
+V SNG G KS+ +++ SM L++ PY V+ ++ +QE+ +S F+ L
Sbjct: 654 QVTSNGRVSLGSGLKSKALQNLSMQLRKCCNHPYLFVEHYNMYQRQEIV-RSSGKFELLD 712
Query: 734 NLKDK 748
L K
Sbjct: 713 RLLPK 717
>03_05_0941 +
29008322-29009686,29009929-29010012,29010889-29011052,
29011208-29011233,29011494-29011583,29012135-29012229,
29012328-29012495
Length = 663
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 446 EENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKN 583
+ENY Y D +D+ L K + DI + LK+ + E+ S + N
Sbjct: 406 KENYTYFTDDNDLSLFGHKNNRRDIGLFDLKHNSREELVSPQLWSN 451
>09_04_0377 + 17086775-17088310
Length = 511
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +2
Query: 383 DEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVK 562
+E + K E+PK++ D EE+ S +SD +L D R K K +
Sbjct: 163 EEEEEEKKESPKKVASSDKSEEEDSKGSSESDSGESDSLSDSSKSDDTRRKKKGRKGSHR 222
Query: 563 SNGMKKNSCGNKSELME-DWSMILKQFPEGPYNLVDETD 676
S+ ++ + S E D + ++ EG Y+ D D
Sbjct: 223 SSKRSRHRRRHHSSDTEGDDNSKAEEDSEGSYDSEDSMD 261
>02_04_0516 +
23593088-23593116,23593209-23593336,23593527-23593714,
23593861-23593919,23594997-23595345,23596081-23596333,
23596404-23597476
Length = 692
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 404 VETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKN 583
+E+ K ++++ E + YH D DDV + N + V++ K ++K + K KK
Sbjct: 27 IESTKPVREKITEPKTPYHSMIDEDDVENYQQENIWNPV-VMKKKKKKKKKKKKKKKKKK 85
Query: 584 SCGNKSE 604
NK +
Sbjct: 86 KKKNKKK 92
>09_03_0161 -
12921692-12921880,12922664-12922739,12923045-12923157,
12923250-12923477
Length = 201
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 161 RLPQKICDHCSRKVNEFYEFCNETIVVENKLQAFLKQQGTHN 286
RL QK D+ V E + C E E KL AFL T N
Sbjct: 88 RLEQKKDDYFGEHVEEIVDVCTEASSCEIKLVAFLPSHLTSN 129
>02_05_0542 +
29868988-29869062,29869357-29869788,29869920-29870186,
29870270-29870638
Length = 380
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 554 EVKSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLV 664
EV S ++SC +KS L+ D L P +NLV
Sbjct: 78 EVLSAVANRSSCDHKSSLVADVQFFLNDLPGNDFNLV 114
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 347 EQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYL-TNLKAKKNDID 523
++ R D G D+ K ++ P E K+ D+ + + S S+D L +N K K+D
Sbjct: 692 DKKRRSDRGNRGDKDEKY-LKDPMEDKKLDVSSVAHKRSSSASEDEMLNSNSKRSKHDAA 750
Query: 524 VIRLKNREKHEVKSNGMKKNSCGNKSE 604
+ + +++ ++ + +S G+KSE
Sbjct: 751 LECHERKDEDHIEEDRRDLDSVGSKSE 777
>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
Length = 696
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 428 QEDIEAEENYHYSDDSDDVYLTNLKAKK 511
+ D E +E DDS D+YLTN+ K
Sbjct: 553 RNDFEYKEAEKLKDDSTDIYLTNMNQPK 580
>04_04_1212 -
31786063-31786195,31786275-31786398,31786486-31786597,
31786691-31786822,31786929-31787111,31787351-31787479,
31787618-31787788,31788142-31788244,31788628-31788737,
31789158-31789265,31789337-31789512,31790082-31790352,
31790524-31790738,31791042-31792574,31792665-31792728,
31793171-31793251
Length = 1214
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +2
Query: 410 TPKEIKQEDIEAE-ENYHYSDDS-----DDVYLTNLKAKKNDIDVIRLKNREKHEVKSNG 571
T K I++E + E E ++DD D+ Y ++ ++D+D L+ R + + N
Sbjct: 256 TGKSIEREPLSRETEKVLFADDDPRIIKDEQYEPDIAPVQDDVDPQVLRRRLEELAEKNY 315
Query: 572 MKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVK 688
+ N C E+++ S+I L E D+ +K
Sbjct: 316 LAGNKCFVFPEVVQADSVIDLYLNHSMSALASEPDILIK 354
>04_04_0717 -
27525117-27525248,27525384-27525549,27525629-27525831,
27525911-27526048,27526642-27526725,27526864-27526950,
27527048-27527120,27527169-27527432,27527692-27527768,
27527886-27527957,27528049-27528209,27528238-27528484,
27528588-27528707,27528846-27528929,27529205-27529341,
27529689-27529856,27530093-27530317,27530865-27530952,
27531033-27531194,27532797-27532919
Length = 936
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 122 KMALLPVKIDKNDRLPQKICDHCSRKVNEFYEFCN-ETIVVENKLQAFLKQQGTHNTTVD 298
++A+ P DK +L + + ++K++E E E +ENK ++Q THN T+
Sbjct: 30 RLAVAPTSEDK--KLDFTVLKYKNQKLSEQLEAHKFEYRALENKFAGLKEKQRTHNETLS 87
Query: 299 LI 304
L+
Sbjct: 88 LV 89
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 53 CRLCCSDKFVNNYIFDEKNAW 115
CR C+D VN Y DE+ AW
Sbjct: 541 CRRNCADFLVNGYSNDEEAAW 561
>04_04_0225 + 23745404-23747788
Length = 794
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 41 MDTICRLCCSDKFVNNYIFDEKNAWYLKMALLPVKIDKN 157
MD +LC +D F +F+E N W K+ + ++D +
Sbjct: 380 MDDCQKLCLTDCFCAVTVFNEGNCWKKKLPMSNGRMDSS 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,000,053
Number of Sequences: 37544
Number of extensions: 301084
Number of successful extensions: 1103
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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