Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0006
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    25   1.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.8  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   5.8  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    24   5.8  

>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 290 TVDLILGKPKTPILPPKTCEQSLR 361
           T  +IL K + PI+P + C+++LR
Sbjct: 103 TYQVILKKIELPIMPNEECQKALR 126


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 380  VDEVVKIKVETPKEIK-QEDIEAEENYHYSDDS 475
            +DEV KIK +  ++I+ Q +   EE   Y ++S
Sbjct: 1004 MDEVDKIKAQIEQDIRDQPNAPEEEKIRYRNES 1036


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 380  VDEVVKIKVETPKEIK-QEDIEAEENYHYSDDS 475
            +DEV KIK +  ++I+ Q +   EE   Y ++S
Sbjct: 1005 MDEVDKIKAQIEQDIRDQPNAPEEEKIRYRNES 1037


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 638 TALISSTNLPSAQTCF-RMNFSSYHYFLL 555
           TA +   NLP A TCF R++   Y  + L
Sbjct: 851 TADVPLQNLPKAHTCFNRLDLPMYDSYQL 879


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 309 PSMRSTVVLCVPCCFKKACSLFS 241
           P M +  V+C+  C+ KA  +F+
Sbjct: 52  PQMDNGTVMCIHQCYYKAIGMFA 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,310
Number of Sequences: 2352
Number of extensions: 13005
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)