Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0006
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16030.1 68418.m01874 expressed protein 36 0.038
At3g28770.1 68416.m03591 expressed protein 35 0.050
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 33 0.20
At1g67230.1 68414.m07652 expressed protein 32 0.47
At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein ... 31 0.62
At4g09780.1 68417.m01607 meprin and TRAF homology domain-contain... 31 1.1
At2g36420.1 68415.m04471 expressed protein 31 1.1
At5g65120.1 68418.m08192 expressed protein 30 1.4
At3g29075.1 68416.m03637 glycine-rich protein 30 1.9
At5g52830.1 68418.m06558 WRKY family transcription factor 29 2.5
At3g01780.1 68416.m00118 expressed protein est hit, 29 2.5
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 2.5
At1g75190.1 68414.m08735 expressed protein 29 2.5
At4g25640.1 68417.m03692 MATE efflux family protein similar to r... 29 3.3
At5g45570.1 68418.m05596 Ulp1 protease family protein contains P... 29 4.4
At5g36740.1 68418.m04402 PHD finger family protein 29 4.4
At5g36670.1 68418.m04388 PHD finger family protein 29 4.4
At5g17910.1 68418.m02100 expressed protein 28 5.8
At4g18020.3 68417.m02683 pseudo-response regulator 2 (APRR2) (TO... 28 5.8
At4g18020.2 68417.m02682 pseudo-response regulator 2 (APRR2) (TO... 28 5.8
At4g18020.1 68417.m02681 pseudo-response regulator 2 (APRR2) (TO... 28 5.8
At1g11440.1 68414.m01314 expressed protein 28 5.8
At5g23990.1 68418.m02819 ferric-chelate reductase, putative simi... 28 7.7
At5g03230.1 68418.m00271 expressed protein contains Pfam profile... 28 7.7
At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein... 28 7.7
At3g25100.1 68416.m03135 cell division control protein-related c... 28 7.7
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 28 7.7
At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kina... 28 7.7
At1g63950.1 68414.m07243 heavy-metal-associated domain-containin... 28 7.7
At1g58050.1 68414.m06579 helicase domain-containing protein cont... 28 7.7
At1g04410.1 68414.m00432 malate dehydrogenase, cytosolic, putati... 28 7.7
>At5g16030.1 68418.m01874 expressed protein
Length = 339
Score = 35.5 bits (78), Expect = 0.038
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 5/120 (4%)
Frame = +2
Query: 236 VVENKLQAFLKQQGTHNTT-VDLILGKP---KTPILPPKTCEQSLRIDEGIPVDEVVKIK 403
+ E K+ + G +TT VDL G P KTP + ++ ++ + D+ PVD +K+K
Sbjct: 189 LAEKKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLKRHVEADDW-PVDINLKVK 247
Query: 404 VETPKEIKQEDIE-AEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKK 580
+ +++K E+ E EE S++ D+ K ++ D ++ ++ E K+ K+
Sbjct: 248 GQ-QQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEEDEQEEEEKTKKKKR 306
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 35.1 bits (77), Expect = 0.050
Identities = 31/121 (25%), Positives = 54/121 (44%)
Frame = +2
Query: 386 EVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKS 565
E K + + ++ K+E+ ++EE + + +LKAKK + + K E H+ K
Sbjct: 1024 EEAKKEKKKSQDKKREEKDSEERKSKKEKEES---RDLKAKKKEEETKEKKESENHKSKK 1080
Query: 566 NGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDENSADFDDLPNLKD 745
KK NKS E+ K+ E +E D ++++D+NS + N K
Sbjct: 1081 KEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEE-DKKDMEKLEDQNSNKKKEDKNEKK 1139
Query: 746 K 748
K
Sbjct: 1140 K 1140
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Frame = +2
Query: 236 VVENKLQAFLKQQGTHNTTV----DLILGKPKTPILPPKTCEQSLRIDEGIPVDE--VVK 397
+V KLQA +GT+N T D +G K L K +++ G+ DE + +
Sbjct: 584 LVMGKLQA--PAEGTYNLTCFCLCDTWIGCDKKQALKVKVLKRTRAGTRGLVSDEGAIAE 641
Query: 398 IKVETPKEIKQEDIEAEENYHYSDDSDD 481
+E EI++ED + + YS+D D+
Sbjct: 642 EGMEEEDEIEEEDYDDDYESEYSEDEDE 669
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 31.9 bits (69), Expect = 0.47
Identities = 25/84 (29%), Positives = 39/84 (46%)
Frame = +2
Query: 380 VDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEV 559
+D+ +K KV ++ + E EE + + D L K K+ND D +RLK E
Sbjct: 367 IDDSLKSKVAEVEKREAEWKHMEEKVAKREQALDRKLEKHKEKENDFD-LRLKGISGREK 425
Query: 560 KSNGMKKNSCGNKSELMEDWSMIL 631
+K K +L+ED +IL
Sbjct: 426 ALKSEEKALETEKKKLLEDKEIIL 449
>At5g50020.1 68418.m06195 zinc finger (DHHC type) family protein
contains Pfam profile PF01529: DHHC zinc finger domain
Length = 407
Score = 31.5 bits (68), Expect = 0.62
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 203 NEFYE-FCNETIVVENKLQAFLKQQGTHNTTVDLILGKPKTPILPPKTCEQSLRIDEGIP 379
N F+E FC++ N +AF+K++ N T+ +P+ + E+ ++++ +
Sbjct: 269 NNFFETFCSKVKPSRNDFRAFIKEEPPRNITLATTWERPEEADEENRE-ERRQKVEDDLD 327
Query: 380 VDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDV 484
+DE V +K++ + D E + H+ D D +
Sbjct: 328 IDEDV-MKLQQ----RLNDEEGSDTAHHKIDIDQM 357
>At4g09780.1 68417.m01607 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein low similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 443
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +3
Query: 78 SSTIIYLTKRMHGTLKWRYYPLRLTRTIGCPRRFVIIAVVKLTSFMSFVMKLL 236
SS Y+ K H L + Y L+ TI CP++F+I+ ++ + S++MKL+
Sbjct: 21 SSLYFYICKS-HFCLPYIYTTLK--STIFCPKKFIIMETLREEAPSSYLMKLV 70
>At2g36420.1 68415.m04471 expressed protein
Length = 439
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 404 VETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKN 583
VE ++ +E+ E EE Y S++ D++ + + + D+D RE + KKN
Sbjct: 309 VELEGKMSEEEDEEEEEYEESEEDDNIRIYDSDEEYEDVD--EAMARESRCAEDEKRKKN 366
Query: 584 SCGNKS-ELMEDW 619
K +M W
Sbjct: 367 DERQKKWRMMNAW 379
>At5g65120.1 68418.m08192 expressed protein
Length = 317
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/110 (22%), Positives = 44/110 (40%)
Frame = +2
Query: 380 VDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEV 559
VD++VK T + E + +Y ++ DV + + DIDV K+ E
Sbjct: 67 VDDLVKESTRTSDTNEASSSEDKISYDCDSENLDVKESQGETNAGDIDVEPSKDDTVKET 126
Query: 560 KSNGMKKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDEN 709
N CG++++ + + + F N + VP Q +K N
Sbjct: 127 CEKDSNMNVCGSQTDAVTSEDLAMTLFSSN-NNESEGLLVPNPQAIKSFN 175
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 416 KEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKN 583
K+ +D E ++ HY+DD D+ K ND D + K +E H+ + KK+
Sbjct: 209 KKDYNDDDEKKKKKHYNDDDDE---KKKKHNYNDDDDEKKKKKEYHDDEDKKKKKH 261
>At5g52830.1 68418.m06558 WRKY family transcription factor
Length = 348
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 314 PKTPILPPKTCEQSLRIDEGIPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLT 493
P TP L Q DE + EV + E +E++++D E E++ DD DD+ +
Sbjct: 265 PTTP-LKGNDDVQETNGDEDMVGQEVNMEEEEEEEEVEEDDEEEEDD----DDVDDLLIP 319
Query: 494 NLKAKKND 517
NL + D
Sbjct: 320 NLAVRDRD 327
>At3g01780.1 68416.m00118 expressed protein est hit,
Length = 1176
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = +2
Query: 374 IPVDEVVKIKVETPKEIK--QEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNRE 547
I ++ + +K PK+ +E+ E EE ++ DD + K K+ D K +E
Sbjct: 1077 ISMERIALLKAAQPKKTSKIEEESENEEEEEGEEEDDDEEVKEKKEKEEGKDKEEKKKKE 1136
Query: 548 KHE---VKSNGMKKNSCGNKSELMEDWSMILK 634
K + K + ++ ++++W ++ K
Sbjct: 1137 KEKGTFSKLTAEETEHMALQAAVLQEWHILCK 1168
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/104 (19%), Positives = 51/104 (49%)
Frame = +2
Query: 395 KIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGM 574
+++ E K I Q + +A + ++++ T L+ +K + L E + K G+
Sbjct: 1550 RVRNEMAKRILQVESKANDGSSKKNETEGQESTGLRGRKKRENHQELVELETSDQKK-GV 1608
Query: 575 KKNSCGNKSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDE 706
K++ K+E++ED ++ E + D+ ++ ++E+ ++
Sbjct: 1609 KEDEVVGKAEIIEDEYDSSRKIHEHEERMSDKLEMHGEEEMSEK 1652
>At1g75190.1 68414.m08735 expressed protein
Length = 131
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +2
Query: 404 VETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKN 583
+E P++ K+E+ E +E+Y +D ++ + ++ ++ + R K ++K S M+K
Sbjct: 38 LENPEDFKKEESEEDEDYEEYEDEEE------EDEEAEVVINREKLKKKVRSSSGSMEKE 91
Query: 584 SCGNKSELMED 616
EL E+
Sbjct: 92 QKMKHEELEEE 102
>At4g25640.1 68417.m03692 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 488
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 354 LCSHVLG-GRIGVFGFPSMRSTVVLCVPCCFKKACSLFSTTIVSL 223
LC G G++ + G RS ++L V C F +F+T ++ L
Sbjct: 99 LCGQAYGAGQVNMLGVYMQRSWIILFVSCFFLLPIYIFATPVLRL 143
>At5g45570.1 68418.m05596 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At4g08430, At5g28235
Length = 921
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 389 VVKI-KVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIR 532
VVK+ KV++PK ++++ + A + DD DV T+ A K D +R
Sbjct: 536 VVKVEKVDSPKPLQKKSVAAPTTKTFDDDVVDV--TDKMANKATADALR 582
>At5g36740.1 68418.m04402 PHD finger family protein
Length = 1179
Score = 28.7 bits (61), Expect = 4.4
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +2
Query: 362 IDEGIPVDEV---VK---IKVETPKEIKQEDIEAEENYHYSDD-SDDVYLTNLKAKKNDI 520
+ G VDEV VK +K P+EI+ +D +E DD SDD ++ K+
Sbjct: 90 VSGGSSVDEVKEEVKQECVKSLVPEEIRGDDFRSEVKVESKDDRSDDGKEEKVQRKRGRP 149
Query: 521 DVIRLKNR-EKHEVKSNGMKKNSCGNKSELMED 616
+ ++ + + + SN + S G K EL+ D
Sbjct: 150 RKFGMSSQSDDNGLISNCKLRTSLGKKKELVGD 182
>At5g36670.1 68418.m04388 PHD finger family protein
Length = 1193
Score = 28.7 bits (61), Expect = 4.4
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = +2
Query: 362 IDEGIPVDEV---VK---IKVETPKEIKQEDIEAEENYHYSDD-SDDVYLTNLKAKKNDI 520
+ G VDEV VK +K P+EI+ +D +E DD SDD ++ K+
Sbjct: 90 VSGGSSVDEVKEEVKQECVKSLVPEEIRGDDFRSEVKVESKDDRSDDGKEEKVQRKRGRP 149
Query: 521 DVIRLKNR-EKHEVKSNGMKKNSCGNKSELMED 616
+ ++ + + + SN + S G K EL+ D
Sbjct: 150 RKFGMSSQSDDNGLISNCKLRTSLGKKKELVGD 182
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 446 EENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMK-KNSCGNKSELMEDWS 622
EE H S+DSD + K +D+ I L + E H +S+ M+ + S K + + D
Sbjct: 598 EEKSHSSEDSDFDEQADSKKLHHDVAEIVLGSGETHHEQSDMMEGETSDKGKLDEVSDSD 657
Query: 623 MILKQFPEGPYNLVDETDVPVKQEVKD 703
L + E ++ ++ + + ++V D
Sbjct: 658 SSLSEKEEKIRDISEDEAMLISEQVVD 684
>At4g18020.3 68417.m02683 pseudo-response regulator 2 (APRR2) (TOC2)
identical to pseudo-response regulator 2 GI:7576356 from
[Arabidopsis thaliana]
Length = 487
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 410 TPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKND-IDVIRLKNREKHEVKSNGMKKNS 586
T +++ + + +E S+ ++ +L ++K D +D+ + ++ K KS+G+K N
Sbjct: 231 TNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIK-NV 289
Query: 587 CGNK-SELMEDWSMIL-KQFPEGPYNLVDETDVP 682
GNK S DW+ L K+F + L + +P
Sbjct: 290 SGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIP 323
>At4g18020.2 68417.m02682 pseudo-response regulator 2 (APRR2) (TOC2)
identical to pseudo-response regulator 2 GI:7576356 from
[Arabidopsis thaliana]
Length = 535
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 410 TPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKND-IDVIRLKNREKHEVKSNGMKKNS 586
T +++ + + +E S+ ++ +L ++K D +D+ + ++ K KS+G+K N
Sbjct: 231 TNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIK-NV 289
Query: 587 CGNK-SELMEDWSMIL-KQFPEGPYNLVDETDVP 682
GNK S DW+ L K+F + L + +P
Sbjct: 290 SGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIP 323
>At4g18020.1 68417.m02681 pseudo-response regulator 2 (APRR2) (TOC2)
identical to pseudo-response regulator 2 GI:7576356 from
[Arabidopsis thaliana]
Length = 535
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +2
Query: 410 TPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKND-IDVIRLKNREKHEVKSNGMKKNS 586
T +++ + + +E S+ ++ +L ++K D +D+ + ++ K KS+G+K N
Sbjct: 231 TNRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIK-NV 289
Query: 587 CGNK-SELMEDWSMIL-KQFPEGPYNLVDETDVP 682
GNK S DW+ L K+F + L + +P
Sbjct: 290 SGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIP 323
>At1g11440.1 68414.m01314 expressed protein
Length = 363
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 359 RIDEGIPVDEVVKIKVETPKEIKQE-----DIEAEENYHYSDDSDDVYLTNLKAKKNDID 523
R+ PV+EV I ET KE +QE D E+E+ DD ++ + +AK+ + D
Sbjct: 197 RVSFAEPVEEVKPI--ETIKEQEQEQDEDYDEESEDEDDGDDDDEEEEEGDEEAKEEEKD 254
Query: 524 VIRLKNREKHEVKSNGMKK 580
E++EV G K
Sbjct: 255 HSSSYGNEEYEVVDKGEVK 273
>At5g23990.1 68418.m02819 ferric-chelate reductase, putative similar
to ferric-chelate reductase (FRO1) [Pisum sativum]
GI:15341529; contains Pfam profile PF01794: Ferric
reductase like transmembrane component
Length = 657
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 15 IYFIT*LKLWILFAVCVVPINSSTIIYLTKR 107
IY T LW++F CV SS+II+L ++
Sbjct: 520 IYNFTYRVLWVMFLGCVCIFISSSIIFLWRK 550
>At5g03230.1 68418.m00271 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 166
Score = 27.9 bits (59), Expect = 7.7
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 443 AEENYHYSDDSD-----DVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKNSCGNKSEL 607
++EN D+SD D L N K I + RL+ + S + G+
Sbjct: 23 SDENVFEFDESDIHNLGDHQLPNSFDAKRSISISRLRRKPTKTGDSGNREITKTGSLPVN 82
Query: 608 MEDWSMILKQFPEGPYNLVDETD 676
+ DWS ILK G D++D
Sbjct: 83 IPDWSKILKSEYRGHAIPDDDSD 105
>At4g19190.1 68417.m02832 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 595
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 464 SDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSN 568
S D D Y +N KK D + +RE+ +V SN
Sbjct: 433 SSDDSDYYRSNSSRKKRSEDDYKSHHRERKQVHSN 467
>At3g25100.1 68416.m03135 cell division control protein-related
contains weak similarity to cell division control
protein 45 homolog (Suppressor of nda4 protein)
(Swiss-Prot:O74113) [Schizosaccharomyces pombe]
Length = 596
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 383 DEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKND-IDVIRLKNREKHEV 559
+E +++VE E E+ E EE DD DD + + K D + V + R+ +++
Sbjct: 157 NESFQLRVEDAGEESDEEEEDEEEDEEDDDDDDGDRPSKRRKMGDGVKVFKKLKRDYYKM 216
Query: 560 KSNGMKKNSC 589
+ K + C
Sbjct: 217 GTFHGKPSGC 226
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/97 (21%), Positives = 43/97 (44%)
Frame = +2
Query: 416 KEIKQEDIEAEENYHYSDDSDDVYLTNLKAKKNDIDVIRLKNREKHEVKSNGMKKNSCGN 595
+E + +D EEN + ++ D+ ++N D K E++ ++ NG + GN
Sbjct: 185 EEDENDDENTEENGNDEENDDE------NTEENGNDEENEKEDEENSMEENGNESEESGN 238
Query: 596 KSELMEDWSMILKQFPEGPYNLVDETDVPVKQEVKDE 706
+ ME+ + + E V + V+ + +DE
Sbjct: 239 EDHSMEENGSGVGEDNENEDGSVSGSGEEVESDEEDE 275
>At1g71010.1 68414.m08192 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to phosphatidylinositol
3,5-kinase [Candida albicans] GI:14571648; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1648
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 377 PVDEVVKIKVETPKEIKQEDIEAEENY-HYSDDSDDV 484
P+D ++ P + E+ +AE NY HY D+ DD+
Sbjct: 254 PLDFENNGRIWYPPPPEDENDDAESNYFHYDDEDDDI 290
>At1g63950.1 68414.m07243 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 113
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 374 IPVDEVVKIKVETPKEIKQEDIEAEENYHYSDDSDDVY 487
+P D + + K+ K+ K+E+IE E Y Y+ + D++
Sbjct: 66 VPYDALKEAKIAEAKQ-KREEIEREALYRYNREIRDIF 102
>At1g58050.1 68414.m06579 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1417
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 62 CCSDKFVNNYIFDEKNAWYLKMALLPVKIDKNDRL 166
CC FV Y DE+N +K+ALL K++ + L
Sbjct: 1123 CCKSPFV--YAKDEQNVDRVKLALLSDKLESSSNL 1155
>At1g04410.1 68414.m00432 malate dehydrogenase, cytosolic, putative
strong similarity to malate dehydrogenase from
Mesembryanthemum crystallinum [SP|O24047], Medicago
sativa [SP|O48905], Prunus persica [GI:15982948];
contains InterPro entry IPR001236: Lactate/malate
dehydrogenase
Length = 332
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +2
Query: 335 PKTCEQS-LRIDEGIPVDEVVKIKVE-TPKEIKQE 433
P TC I +G+P+DEV + K++ T +E+K+E
Sbjct: 289 PVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEE 323
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,787,005
Number of Sequences: 28952
Number of extensions: 274725
Number of successful extensions: 1158
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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