Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0004
         (537 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.74 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 94  KNKLC*FLSICVPLDTFTGTFR*NLAIKSEEIPLCESSTLVDTSDVYETSEPVS 255
           KN +C  LS+ +  D      + +L +  E    C+++T+ +  ++YE S  VS
Sbjct: 262 KNFVC-LLSLIILCDCVVKEAQKSLVLTYEMRWYCQTATMEEKQELYEFSNFVS 314


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = -2

Query: 251 TGSDVSYTSEVSTNVLLSQRGISSDLMAKFHLNVPVNVSRG 129
           T + ++Y     TN+ +  +G   ++++ F     +++SRG
Sbjct: 421 TVAQLNYPGVTVTNIEVQAKGGKPNVLSTFWQQSDLDLSRG 461


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,017
Number of Sequences: 336
Number of extensions: 2387
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)