Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120960.seq
(633 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 89 6e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 89 6e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 75 1e-12
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 71 3e-11
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 70 4e-11
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 69 1e-10
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 68 2e-10
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 68 2e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 66 5e-10
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 65 1e-09
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 65 1e-09
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 65 2e-09
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 64 4e-09
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 64 4e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 62 1e-08
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 61 2e-08
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 61 2e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 59 1e-07
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 57 4e-07
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 57 4e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 57 4e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 57 4e-07
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 56 5e-07
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 56 7e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 9e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 56 9e-07
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 56 9e-07
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 55 1e-06
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 52 2e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 1e-04
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 48 2e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 47 4e-04
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 46 8e-04
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 43 0.007
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 42 0.009
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 42 0.016
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.028
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 40 0.066
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.087
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.46
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 37 0.46
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 36 0.81
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 36 0.81
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 35 1.4
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 34 3.3
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.3
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 33 5.7
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 7.5
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 33 7.5
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 10.0
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 32 10.0
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 32 10.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 89.4 bits (212), Expect = 6e-17
Identities = 53/108 (49%), Positives = 55/108 (50%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 115 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLS 174
Query: 488 FDQLPLFYEL*GLQXXYXXDHXXXXXXXXXXXXXIRKLKYIIFDPAGG 631
FDQ+PLF G+ R L FDPAGG
Sbjct: 175 FDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGG 222
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 141
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHA 59
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVPL+LGAPD+AFPR+NN F PP L
Sbjct: 77 NWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 89.4 bits (212), Expect = 6e-17
Identities = 53/108 (49%), Positives = 55/108 (50%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS S
Sbjct: 91 VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMS 150
Query: 488 FDQLPLFYEL*GLQXXYXXDHXXXXXXXXXXXXXIRKLKYIIFDPAGG 631
FDQ+PLF G+ R L FDPAGG
Sbjct: 151 FDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGG 198
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHA 141
ELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHA 35
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N L+PL+LGAPD+AFPR+NN F PP L
Sbjct: 53 NWLIPLMLGAPDMAFPRMNNMSFWLLPPSL 82
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/62 (59%), Positives = 44/62 (70%)
Frame = -1
Query: 426 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLNYL 247
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL L
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNL-ML 136
Query: 246 FV 241
F+
Sbjct: 137 FI 138
Score = 55.6 bits (128), Expect = 9e-07
Identities = 30/46 (65%), Positives = 33/46 (71%)
Frame = -2
Query: 140 ACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 3
A AVT+ L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 173 AWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = -3
Query: 283 KGGG*ESKS*LFIRGNAISGAPSIRGTNQFPNPP 182
K GG LFIRGNA+SGAP++ GTNQFPNPP
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPP 159
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 70.5 bits (165), Expect = 3e-11
Identities = 46/108 (42%), Positives = 49/108 (45%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 488 FDQLPLFYEL*GLQXXYXXDHXXXXXXXXXXXXXIRKLKYIIFDPAGG 631
Q PLF + R L FDPAGG
Sbjct: 179 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGG 226
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/47 (51%), Positives = 26/47 (55%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 141
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHA 63
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVPL+LGAPD+AFPR+NN F PP L
Sbjct: 63 NWLVPLMLGAPDMAFPRLNNMSFWFLPPSL 92
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHA 141
ELG PGS IG+DQ+YN +VTAHA
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHA 45
Score = 33.9 bits (74), Expect = 3.3
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
+V ITA SLPVLAGAIT+LLTD
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTD 195
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 68.5 bits (160), Expect = 1e-10
Identities = 44/108 (40%), Positives = 48/108 (44%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 488 FDQLPLFYEL*GLQXXYXXDHXXXXXXXXXXXXXIRKLKYIIFDPAGG 631
Q PLF + R L FDPAGG
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGG 225
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 141
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 141
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 51
Score = 40.7 bits (91), Expect = 0.028
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPP 278
N L+PL++GAPD+AFPR+NN F PP
Sbjct: 69 NWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 141
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHA 62
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
AV ITA SLPVLAGAIT+LLTD
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTD 131
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/67 (50%), Positives = 40/67 (59%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS +
Sbjct: 119 VEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMT 178
Query: 488 FDQLPLF 508
++PLF
Sbjct: 179 MSRIPLF 185
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPLY 287
N VPL++GAPD+AFPR+NN F PP L+
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 41.5 bits (93), Expect = 0.016
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHA 141
EL +PGS++GDD +YN IVTAHA
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHA 63
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
+V ITA SLPVLAGAIT+LLTD
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTD 213
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/67 (53%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS S
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMS 178
Query: 488 FDQLPLF 508
++PLF
Sbjct: 179 MHKMPLF 185
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +1
Query: 1 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHA 141
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHA 62
Score = 42.3 bits (95), Expect = 0.009
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVPL++GAPD+AFPR+NN F PP L
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
A+ +TA SLPVLAGAIT+LLTD
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTD 212
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
A+ +TA SLPVLAGAIT+LLTD
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTD 212
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 179 MHKLPLF 185
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN 254
N L+PL++GA D AFPRINN
Sbjct: 81 NYLLPLMIGATDTAFPRINN 100
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS +
Sbjct: 119 VESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 179 MHKLPLF 185
Score = 33.5 bits (73), Expect = 4.3
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN 254
N L+PL++GA D AFPRINN
Sbjct: 81 NYLLPLMIGATDTAFPRINN 100
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/67 (49%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS +
Sbjct: 119 VESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMT 178
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 179 MHKLPLF 185
Score = 33.1 bits (72), Expect = 5.7
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DF 263
N ++PL++GA D AFPRINN F
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGF 103
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS +
Sbjct: 121 VEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMT 180
Query: 488 FDQLPLF 508
+LPLF
Sbjct: 181 MHRLPLF 187
Score = 40.7 bits (91), Expect = 0.028
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N VP+++GAPD+AFPR+NN F PP L
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
Score = 32.7 bits (71), Expect = 7.5
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
+V +TA SLPVLAGAIT+LLTD
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTD 215
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/40 (70%), Positives = 32/40 (80%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
Score = 32.3 bits (70), Expect = 10.0
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 73 ELGNPG-SLIGDDQIYNTIVTAHA 141
EL PG I D+Q+YN+I+TAHA
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHA 63
Score = 32.3 bits (70), Expect = 10.0
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN 254
N L+PL LG PD+ FPR+NN
Sbjct: 81 NFLLPLGLGGPDMGFPRLNN 100
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 13 VEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/67 (47%), Positives = 38/67 (56%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS S
Sbjct: 126 VEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQS 185
Query: 488 FDQLPLF 508
++PLF
Sbjct: 186 MYRIPLF 192
Score = 40.7 bits (91), Expect = 0.028
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++G+PD+AFPR+NN F PP L
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 136 IDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMD 195
Query: 488 FDQLPLF 508
+ +LPLF
Sbjct: 196 YSKLPLF 202
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAHA 141
ELG PGSLIG+DQIYN+IVT+HA
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHA 46
Score = 36.3 bits (80), Expect = 0.61
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DF 263
N L+PL+LG+PD++FPR+NN F
Sbjct: 64 NWLIPLMLGSPDMSFPRMNNMSF 86
Score = 33.5 bits (73), Expect = 4.3
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
+V ITA SLPVLAGAIT+LLTD
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTD 196
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 56.0 bits (129), Expect = 7e-07
Identities = 27/39 (69%), Positives = 28/39 (71%)
Frame = +2
Query: 311 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 35.5 bits (78), Expect = 1.1
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DF 263
N VP+++GAPD++FPR+NN F
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSF 106
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 55.6 bits (128), Expect = 9e-07
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 403
VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 34 VENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 36.7 bits (81), Expect = 0.46
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 210 LILGAPDIAFPRINN*DFDSYPPPL 284
L+LGAPD+AFPR+NN F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 55.6 bits (128), Expect = 9e-07
Identities = 30/67 (44%), Positives = 37/67 (55%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 487
VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 124 VEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMK 183
Query: 488 FDQLPLF 508
++ +PLF
Sbjct: 184 YENVPLF 190
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N L+PL+LGA D+AF R+NN F P L
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSL 115
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 55.6 bits (128), Expect = 9e-07
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 145 IENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPLY 287
N L+P+++G PD+AFPR+NN + P L+
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLLIPSLF 137
Score = 32.3 bits (70), Expect = 10.0
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
AV ITA SLPVLA AIT+LLTD
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTD 239
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 55.2 bits (127), Expect = 1e-06
Identities = 38/113 (33%), Positives = 46/113 (40%)
Frame = +2
Query: 170 TYYNWRIWKLXXXXXXXXXXXXXPTNKXXXXXXXXXXXXXXXXXXXVENGAGTG*TVYPP 349
TYYNW IWKL P NK N + P
Sbjct: 24 TYYNWWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINK---RNSS--------P 72
Query: 350 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 508
L+S+IAH G SVD+AIFSLHLAG+SS + D++PLF
Sbjct: 73 LASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLF 125
Score = 33.1 bits (72), Expect = 5.7
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
AV IT SLPVLAGAIT+LLTD
Sbjct: 128 AVFITTVLLLLSLPVLAGAITMLLTD 153
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 4/44 (9%)
Frame = +2
Query: 308 VENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 147 IEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
Score = 39.9 bits (89), Expect = 0.050
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N L+PL++G PD+AFPR+NN F PP L
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 48.0 bits (109), Expect = 2e-04
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = +2
Query: 314 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 493
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 494 QLPLF 508
++PLF
Sbjct: 223 KMPLF 227
Score = 35.9 bits (79), Expect = 0.81
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DF 263
N VP+++GAPD+AFPR+NN F
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISF 142
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 46.0 bits (104), Expect = 8e-04
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 224 IDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSY 272
N +PL++GAPD+AFPR+NN + Y
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWMY 211
Score = 33.1 bits (72), Expect = 5.7
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 514 AVGITAXXXX*SLPVLAGAITILLTD 591
+V +TA SLPVLAGAIT+LLTD
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTD 318
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPLYY 290
N LVPL+LGAPD+AFPR+NN F +P +Y
Sbjct: 64 NWLVPLMLGAPDMAFPRMNNMSFGFFPLHWHY 95
Score = 41.9 bits (94), Expect = 0.012
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 73 ELGNPGSLIGDDQIYNTIVTAH 138
ELG PGSL+ DDQ+YN +VTAH
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAH 45
Score = 33.1 bits (72), Expect = 5.7
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 374 GRSVDLAIFSLHLAGISS 427
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +1
Query: 70 AELGNPGSLIGDDQIYNTIVTAHA 141
AELG PG+L+GDDQ N IVTAHA
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHA 63
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPP 278
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLLPP 108
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 41.5 bits (93), Expect = 0.016
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.028
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 308 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 39.5 bits (88), Expect = 0.066
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N VP+++G+PD+AFPR+NN F PP L
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.087
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 317 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.46
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 320 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 36.7 bits (81), Expect = 0.46
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +2
Query: 311 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 427
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 35.9 bits (79), Expect = 0.81
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 510 MSCRDYSXXXXMITTCFSWSYYNIIN 587
M C +YS +++TC WSYYN IN
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTIN 109
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 35.9 bits (79), Expect = 0.81
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 311 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
E G G G T+YP L H + D +F++HL GISS
Sbjct: 122 EEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 35.1 bits (77), Expect = 1.4
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPP 278
N L+PL++GA D+AFPRIN F PP
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLLPP 188
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 33.9 bits (74), Expect = 3.3
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N L+PL++GA D++F R+NN F PP L
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.3
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 326 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 427
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 33.1 bits (72), Expect = 5.7
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRIN 251
N ++PL+LGAP++AFPR+N
Sbjct: 91 NWMLPLMLGAPEMAFPRVN 109
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 320 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 427
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.7 bits (71), Expect = 7.5
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1
Query: 523 ITAXXXX*SLPVLAGAITILLTD 591
ITA SLPVLAGAIT+LLTD
Sbjct: 174 ITAVLLLLSLPVLAGAITMLLTD 196
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 271 TPLPYIINFKKNCRKWCRN 327
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 32.3 bits (70), Expect = 10.0
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRINN*DFDSYPPPL 284
N L+PL+LGA D+AF R+NN F P L
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLLVPSL 115
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 32.3 bits (70), Expect = 10.0
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 195 N*LVPLILGAPDIAFPRIN 251
N ++PL +GAPD+AFPR+N
Sbjct: 105 NYVLPLQIGAPDVAFPRLN 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,064,063
Number of Sequences: 1657284
Number of extensions: 6867644
Number of successful extensions: 11890
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 11521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11884
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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