Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120960.seq
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118911-1|AAM50771.1|  356|Drosophila melanogaster LD21610p pro...    30   3.0  
AE014134-1201|AAF52466.1|  356|Drosophila melanogaster CG9200-PA...    30   3.0  

>AY118911-1|AAM50771.1|  356|Drosophila melanogaster LD21610p
           protein.
          Length = 356

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -1

Query: 381 DLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLNYLF 244
           DLP  +  DE GG    P  A   T     N  R  GRS+N N L+
Sbjct: 90  DLPTLSPNDEEGGTNETPTDASSWTQEANKNRDRSNGRSENFNRLW 135


>AE014134-1201|AAF52466.1|  356|Drosophila melanogaster CG9200-PA
           protein.
          Length = 356

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -1

Query: 381 DLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLNYLF 244
           DLP  +  DE GG    P  A   T     N  R  GRS+N N L+
Sbjct: 90  DLPTLSPNDEEGGTNETPTDASSWTQEANKNRDRSNGRSENFNRLW 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,157,186
Number of Sequences: 53049
Number of extensions: 336209
Number of successful extensions: 483
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)