Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120958.seq
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.5  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 282 NDQLMCLLKDIFTNKFDYKIKRRLNHL 362
           ND+++ +L+DI+++  D      L HL
Sbjct: 342 NDEVLQVLEDIYSDLLDLTDNNELFHL 368


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -3

Query: 410 DTRIVRFRRQVGKQ 369
           DTR VR R +VGK+
Sbjct: 8   DTRTVRLRNRVGKR 21


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 54  LIVVLCFYAFYMA 16
           LI++LC Y FY A
Sbjct: 232 LIILLCIYYFYYA 244


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 224 IFRFLETNITFGVVVATRFERPVN 295
           IF ++  NI FG+ + T    PVN
Sbjct: 190 IFTYMPYNIVFGLCLTTFGLLPVN 213


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 107 TPYALVISICSA 72
           TPY L+I +C+A
Sbjct: 285 TPYYLLIEVCNA 296


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 101 YALVISICSANLTKSNSSLYCVFMHFIW 18
           Y L++ +   + T+ +++    F+H IW
Sbjct: 329 YWLLVMVAMFSRTQQSANKTATFVHEIW 356


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 101 YALVISICSANLTKSNSSLYCVFMHFIW 18
           Y L++ +   + T+ +++    F+H IW
Sbjct: 285 YWLLVMVAMFSRTQQSANKTATFVHEIW 312


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 524 IYLNTDTFSGQLPAYLTHYVN 586
           ++   + FSG+LP +L  + N
Sbjct: 462 VFAVINVFSGELPVFLQEHRN 482


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 524 IYLNTDTFSGQLPAYLTHYVN 586
           ++   + FSG+LP +L  + N
Sbjct: 462 VFAVINVFSGELPVFLQEHRN 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,104
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)