Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120957.seq
(483 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 95 3e-20
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 95 3e-20
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 78 4e-15
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 70 9e-13
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 51 4e-07
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 38 0.003
SB_4038| Best HMM Match : v110 (HMM E-Value=5.5) 38 0.006
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 37 0.010
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.013
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 34 0.071
SB_42672| Best HMM Match : DUF755 (HMM E-Value=8.1) 33 0.093
SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 31 0.50
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9) 31 0.66
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 30 0.87
SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003) 29 1.5
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 29 2.0
SB_55961| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19) 29 2.7
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3) 28 3.5
SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.5
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_3257| Best HMM Match : OCD_Mu_crystall (HMM E-Value=3.4e-08) 28 4.6
SB_34167| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00013) 27 8.1
SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 27 8.1
SB_27889| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 1 MQIFVKTLTGKTITLEVEPS 20
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 1 MQIFVKTLTGKTITLEVEPS 20
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 77 MQIFVKTLTGKTITLEVEPS 96
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 153 MQIFVKTLTGKTITLEVEPS 172
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 229 MQIFVKTLTGKTITLEVEPS 248
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 305 MQIFVKTLTGKTITLEVEPS 324
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 381 MQIFVKTLTGKTITLEVEPS 400
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 457 MQIFVKTLTGKTITLEVEPS 476
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 1 MQIFVKTLTGKTITLEVEPS 20
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 77 MQIFVKTLTGKTITLEVEPS 96
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 153 MQIFVKTLTGKTITLEVEPS 172
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 229 MQIFVKTLTGKTITLEVEPS 248
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 305 MQIFVKTLTGKTITLEVEPS 324
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 95.1 bits (226), Expect = 3e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 53.6 bits (123), Expect = 8e-08
Identities = 22/50 (44%), Positives = 38/50 (76%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVL 405
TV +K+KI ++EG+P QRL++ ++L D++++ADYNI++ S LH+ L
Sbjct: 97 TVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 1 MQIFVKTLTGKTITLEVEPS 20
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 77.8 bits (183), Expect = 4e-15
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 298 VPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 42
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 381
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQK
Sbjct: 100 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 141
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPA 253
MQIF+KTLTGKTIT E EP+
Sbjct: 79 MQIFVKTLTGKTITLEVEPS 98
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +1
Query: 250 RRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
+ T+ ++K I K G P DQQRL+F G+ L D T I +TLH+++RL GG
Sbjct: 91 KHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGIFAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +1
Query: 244 GTRRTVADLKQKI-ADK--EGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 387
G TV LKQKI ADK + P +LI+AGK L D + +YNI ++S
Sbjct: 84 GEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLKEYNIDEKS 134
>SB_4038| Best HMM Match : v110 (HMM E-Value=5.5)
Length = 228
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -2
Query: 182 YL*MTTVAVNVPLPPPMVELCNRRPIPTP 96
YL + +N P PPP +++CN+RP+P+P
Sbjct: 50 YLKNASDLMNAPPPPPSLQVCNKRPLPSP 78
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 381
V LK +I K G+P D QRL F K+L D T+A N+++
Sbjct: 29 VFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVNLKQ 69
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 36.3 bits (80), Expect = 0.013
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIF-AGKQLEDSKTMADYNIQKESTLHM 399
TV DLK + +K G+ V RL+ GK++ D + DYNI T+ +
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.013
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +1
Query: 289 KEGVPVDQQRLIFAGKQLEDSKTMADYN 372
+EG+P ++QRLIF GK L+D K + +++
Sbjct: 19 EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.9 bits (74), Expect = 0.071
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 295 GVPVDQQRLIFAGKQLEDSKTMADYN 372
G+P ++QRLIF GK L+D K + +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_42672| Best HMM Match : DUF755 (HMM E-Value=8.1)
Length = 159
Score = 33.5 bits (73), Expect = 0.093
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +1
Query: 193 NANIHQNIDGQNHYRRNGTRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 372
N N NIDG ++ N D +Q+I K+ V QRL K E++ +YN
Sbjct: 88 NINGDNNIDGDSNIDGNNNNDVYDDSQQEIKSKKIVNKQLQRLAMQQKCCENANNRTNYN 147
Query: 373 IQKES 387
+S
Sbjct: 148 SSDKS 152
>SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 32.7 bits (71), Expect = 0.16
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRL 411
TV LKQ I +EG + +Q + F G QL D+ T+ + S H+ LR+
Sbjct: 29 TVLRLKQLIEAQEGFGISEQEVHFQGNQLVDALTLGQQGVLDGS--HLDLRV 78
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFA-GKQLEDSKTMADYNIQKESTLHMVL 405
TV DLK +I + GVP RL + G L D + ++ YN+ +T+ ++L
Sbjct: 1076 TVKDLKNRIELETGVPRHLLRLRYLDGYDLTDDRRLSYYNMVPAATVQVLL 1126
>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
Length = 678
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 149 PLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFS 6
PLPPP VE+ N P P + + +Q + V ++ Q + A D ++
Sbjct: 15 PLPPPPVEMPNEPLPPLPDSVLMNKQRVMGTVHESLQTLLNHASDHYT 62
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 167 TVAVNVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEA 21
TV +P P + + +P+PTP + SL L+S V+ QA + A
Sbjct: 825 TVISALPSPTVVPTVPPAKPVPTPVVSSLTTPLVSATVLNASQAQTRVA 873
>SB_43701| Best HMM Match : ubiquitin (HMM E-Value=0.003)
Length = 227
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLHMVL 405
V+D++Q VP Q+LIF GK L + ++T+ I+K S + MVL
Sbjct: 116 VSDIEQAAQQVTQVPQCSQKLIFKGKSLTNRNQTLESLGIKKGSRI-MVL 164
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 382 ESTLHMVLRLRGG 420
ESTLH+VLRLRGG
Sbjct: 14 ESTLHLVLRLRGG 26
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1
Query: 382 ESTLHMVLRLRGG 420
ESTLH+VLRLRGG
Sbjct: 14 ESTLHLVLRLRGG 26
>SB_55961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 338 CLPAKISLC*STGTPSLSAIFCLRS 264
CL ++S+C STG +LS + C S
Sbjct: 360 CLSTRLSICQSTGRQNLSVLICQSS 384
>SB_46833| Best HMM Match : MGS (HMM E-Value=1.5e-19)
Length = 648
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 309 STKTYLCGQTIGRFQNYGRLQYSKGIYSSHGVTITRRVL 425
STKTYLC +G F+ Y L +S G T+ RV+
Sbjct: 201 STKTYLCKLCLG-FRIYTHLLAKTDFHSYFGCTVHARVV 238
>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
Length = 1165
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 149 PLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEA 21
PLPPP VE+ N P P + + +Q + V ++ Q + A
Sbjct: 463 PLPPPPVEMPNEPLPPLPDSVLMNKQRVMGTVHESLQTLLNHA 505
>SB_30408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 9 ESIYRFLHVGLIIFDYGRGNQLPLKGNNSWCXY 107
++I LH ++ D + +Q KGNNSWC +
Sbjct: 456 QAILAVLHHTVLSDDSKKRHQYCSKGNNSWCGF 488
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 262 ADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
A + Q+I D G V + + G + D + +++ + L +VLR++GG
Sbjct: 253 ASVYQEIRDLGGTGVIALKPVMRGPDINDDGSHERESLRANAVLPLVLRMKGG 305
>SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 9 ESIYRFLHVGLIIFDYGRGNQLPLKGNNSWCXY 107
++I LH ++ D + +Q KGNNSWC +
Sbjct: 507 QAILAVLHHTVLSDDSKKRHQYCPKGNNSWCGF 539
>SB_3257| Best HMM Match : OCD_Mu_crystall (HMM E-Value=3.4e-08)
Length = 157
Score = 27.9 bits (59), Expect = 4.6
Identities = 21/85 (24%), Positives = 30/85 (35%)
Frame = +2
Query: 8 RKHLSLLARRPDNF*LRAWKSIAVEGK*FVVXVSAACCTIPPSVEARAHSQQPLSFISNS 187
R H L + +R W + F + A CC S A A +F +
Sbjct: 41 RSHAEALKHVRNFTEVRVWSRTTANAQRFANDIGAKCCPDVESAVAGADVIVTATFATEP 100
Query: 188 VKMQIFIKTLTGKTITAETEPAGRW 262
V M ++K G I A P +W
Sbjct: 101 VLMGKWVK--KGAVINAVGAPTPKW 123
>SB_34167| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00013)
Length = 477
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 206 IKTLTGKTITAETEPAGRWPISSKK 280
IK G T+T E E A RW S+ K
Sbjct: 433 IKAKDGSTLTTEREQAARWVHSTSK 457
>SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -2
Query: 158 VNVPLPPPMVELCNRR----PIPTPRIISLQRQLISTP 57
VN P PPP+ RR P PTP L R++++ P
Sbjct: 281 VNYPTPPPLRRELVRRIVNYPTPTPLRRELVRRIVNYP 318
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 177 INDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRARSD 19
IND E DG V PS + H R Q LSG SD
Sbjct: 1658 INDVQVAEVTSPVADGVTVTSWMTERAVKRRPSDILHLHVRTQSLSGESTPSD 1710
>SB_27889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 247 TRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI-QKESTLHM 399
T+ +A+ KQ++ +KE ++ +I A KQ + SK I +KES M
Sbjct: 67 TKLLIANQKQRVIEKEAETERKKAIIEAEKQSQVSKIQYQQKIMEKESMKKM 118
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,706,394
Number of Sequences: 59808
Number of extensions: 319518
Number of successful extensions: 1009
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1013948003
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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