Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120957.seq
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 95 2e-20
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 95 2e-20
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 95 2e-20
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 95 2e-20
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 95 2e-20
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 56 1e-08
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 52 2e-07
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 52 2e-07
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 44 6e-05
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 44 6e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 36 0.015
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 35 0.027
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 35 0.036
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 32 0.25
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 31 0.33
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 31 0.33
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 31 0.44
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 30 0.77
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 30 1.0
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 30 1.0
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 30 1.0
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 28 4.1
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 28 4.1
U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF022980-2|AAG24188.3| 343|Caenorhabditis elegans Hypothetical ... 27 7.1
Z46934-1|CAA87039.1| 226|Caenorhabditis elegans Hypothetical pr... 27 9.4
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 9.4
U55367-1|AAA97987.1| 281|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAG 333
T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 305 MQIFVKTLTGKTITLEVE 322
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 457 MQIFVKTLTGKTITLEVE 474
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTL GKTIT E E
Sbjct: 381 MQIFVKTLIGKTITLEVE 398
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 554 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 630 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 706 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 782 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 836
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 305 MQIFVKTLTGKTITLEVE 322
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 457 MQIFVKTLTGKTITLEVE 474
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 533 MQIFVKTLTGKTITLEVE 550
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 609 MQIFVKTLTGKTITLEVE 626
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 685 MQIFVKTLTGKTITLEVE 702
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 761 MQIFVKTLTGKTITLEVE 778
Score = 32.3 bits (70), Expect = 0.19
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTL GKTIT E E
Sbjct: 381 MQIFVKTLIGKTITLEVE 398
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 554 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 630 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 706 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 93.9 bits (223), Expect = 5e-20
Identities = 41/55 (74%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQK+STLH+VLRLRGG
Sbjct: 782 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGG 836
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 305 MQIFVKTLTGKTITLEVE 322
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 381 MQIFVKTLTGKTITLEVE 398
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 457 MQIFVKTLTGKTITLEVE 474
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 533 MQIFVKTLTGKTITLEVE 550
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 609 MQIFVKTLTGKTITLEVE 626
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 685 MQIFVKTLTGKTITLEVE 702
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 761 MQIFVKTLTGKTITLEVE 778
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 95.1 bits (226), Expect = 2e-20
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYNIQKESTLH+VLRLRGG
Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 72.9 bits (171), Expect = 1e-13
Identities = 32/55 (58%), Positives = 41/55 (74%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 423
V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY + S LH+VL LRGG+
Sbjct: 23 VERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGGF 77
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP 304
M I +KTLTGK I + EP R +K+ K+ P
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIP 37
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 414
TV LK K+ +K GVP DQQRLIF QLE+ + + YNI+ E +H+V R R
Sbjct: 182 TVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 399
+ DL K+A+ + P ++ +D +T++DYNI+ STL +
Sbjct: 111 IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
V +KQKI EG+P ++QRL +AG+QLEDS D I E+T+++ L L GG
Sbjct: 21 VLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
V +KQKI EG+P ++QRL +AG+QLEDS D I E+T+++ L L GG
Sbjct: 21 VLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGIDSEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.4 bits (110), Expect = 3e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 408
TV D+K I + +P L F+GK+LED ++ DYNIQK ST+ M R
Sbjct: 174 TVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/54 (33%), Positives = 38/54 (70%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
+++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +++ ++ RGG
Sbjct: 599 MSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/54 (33%), Positives = 38/54 (70%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
+++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +++ ++ RGG
Sbjct: 599 MSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYLQVKERGG 652
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 35.9 bits (79), Expect = 0.015
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 194 TIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 35.1 bits (77), Expect = 0.027
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 223 QNHYR-RNGTRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 399
+NH++ R T+ +K +I V + R++ GK LED ++A YNIQ+ + + +
Sbjct: 205 ENHWKLRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
Query: 400 VLRLR 414
L+
Sbjct: 265 YSHLK 269
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 34.7 bits (76), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 31.9 bits (69), Expect = 0.25
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 183 TIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 31.5 bits (68), Expect = 0.33
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+F LL+I D+G + +L +++ A +T + NY + +DF R ++G+R +
Sbjct: 10 LFKLLIIGDSGVGKSSL------LLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.33
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+F LL+I D+G + +L +++ A +T + NY + +DF R ++G+R +
Sbjct: 10 LFKLLIIGDSGVGKSSL------LLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 31.1 bits (67), Expect = 0.44
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGK 336
V +KQKI EG+P ++QRL +A +
Sbjct: 21 VLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 30.3 bits (65), Expect = 0.77
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 369
+V LK KI + G+P + L GK L D K +ADY
Sbjct: 164 SVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 63 GNQLPLKGNNSWCXYRPPVAQFHHRWR 143
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 63 GNQLPLKGNNSWCXYRPPVAQFHHRWR 143
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 63 GNQLPLKGNNSWCXYRPPVAQFHHRWR 143
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 155 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAI 18
N P P V+ R PIP P +I ++ +++ PV+ + +V + +
Sbjct: 162 NCPFPDLYVQ---RVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKFV 204
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 155 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAI 18
N P P V+ R PIP P +I ++ +++ PV+ + +V + +
Sbjct: 162 NCPFPDLYVQ---RVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKFV 204
>U39854-1|AAA81076.2| 236|Caenorhabditis elegans Hypothetical
protein W06B11.3 protein.
Length = 236
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 24 FLHVGLIIFDYGRGNQLPLKGNNSWCXYRPPV 119
FLHVGL + Y + LK NS RPP+
Sbjct: 158 FLHVGLSCYVYFQSRNRELKVKNSARVDRPPM 189
>AF022980-2|AAG24188.3| 343|Caenorhabditis elegans Hypothetical
protein T03D3.5 protein.
Length = 343
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Frame = +2
Query: 125 IPPSVEARAHSQQPLS--FISNSVKMQIFIKTLTGKTITAETEPAGRWPISSKKLPIKK 295
IP EARA +P ++S +K + KTL + + G W + P K+
Sbjct: 137 IPIEREARAMKNKPFKKFYLSKMLKKSVDTKTLVDFYYSEKNGIGGNWRLEHPDFPTKE 195
>Z46934-1|CAA87039.1| 226|Caenorhabditis elegans Hypothetical
protein ZK1320.1 protein.
Length = 226
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 384 FLLNIVIGHSFGIFQLFARKD---KSLLIYGHTFFIGNFLLEIGHRPAGSVSAVMVLPVN 214
F +++ +S+ F++F + + K + I FF+G + E G+RP + A ++ +
Sbjct: 9 FYFDVISPYSYIAFEVFQKLETQWKGVTIRYIPFFLGAVMKESGNRPPAMLPARSIMMMT 68
Query: 213 VLMNICIF 190
L F
Sbjct: 69 DLKRTAKF 76
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 26.6 bits (56), Expect = 9.4
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = +1
Query: 304 VDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 399
V+ L + G++L+D++++ YNI + +++
Sbjct: 124 VESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U55367-1|AAA97987.1| 281|Caenorhabditis elegans Hypothetical
protein C55H1.1 protein.
Length = 281
Score = 26.6 bits (56), Expect = 9.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 173 FISNSVKMQIFIKTLTGKTITAETEPAGRWPISSKKLPIK 292
F +NS+ F +T+T KT+ I SK+LP++
Sbjct: 190 FFTNSIPYVDFPRTITQKTVPIGGISVNMEEIKSKRLPVE 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,965,149
Number of Sequences: 27780
Number of extensions: 240764
Number of successful extensions: 794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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