Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120957.seq
(483 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 97 5e-21
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 97 5e-21
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 97 5e-21
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 97 5e-21
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 97 5e-21
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 96 1e-20
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 96 1e-20
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 96 1e-20
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 96 1e-20
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 96 1e-20
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 96 1e-20
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 96 1e-20
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 96 1e-20
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 96 1e-20
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 96 1e-20
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 96 1e-20
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 96 1e-20
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 96 1e-20
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 96 1e-20
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 96 1e-20
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 96 1e-20
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 95 2e-20
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 93 1e-19
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 79 2e-15
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 64 6e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 58 4e-09
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 4e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 4e-07
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 44 5e-05
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 44 7e-05
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 42 3e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 41 4e-04
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 41 5e-04
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 40 9e-04
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 40 0.001
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 39 0.002
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 39 0.002
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 39 0.002
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 39 0.002
At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam ... 39 0.002
At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam ... 39 0.002
At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam ... 39 0.002
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 39 0.002
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 38 0.003
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 37 0.008
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 36 0.014
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 33 0.076
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 33 0.13
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 33 0.13
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 32 0.23
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 31 0.31
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 31 0.31
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 31 0.54
At3g01050.1 68416.m00006 expressed protein 30 0.71
At5g12280.1 68418.m01444 hypothetical protein 30 0.94
At2g35360.1 68415.m04335 ubiquitin family protein contains INTER... 30 0.94
At1g24420.1 68414.m03077 transferase family protein similar to d... 29 1.6
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 29 2.2
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 28 3.8
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 28 3.8
At1g24610.1 68414.m03096 SET domain-containing protein low simil... 28 3.8
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 27 5.0
At4g05240.1 68417.m00791 ubiquitin family protein contains INTER... 27 5.0
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 27 5.0
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 27 5.0
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 27 6.6
At1g47680.1 68414.m05297 hypothetical protein 27 6.6
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 27 8.8
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 27 8.8
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 27 8.8
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 27 8.8
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 97.1 bits (231), Expect = 5e-21
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 423
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 97.1 bits (231), Expect = 5e-21
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 423
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 97.1 bits (231), Expect = 5e-21
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 423
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 97.1 bits (231), Expect = 5e-21
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 423
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG+
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 305
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 97.1 bits (231), Expect = 5e-21
Identities = 44/55 (80%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ +LK KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 89.8 bits (213), Expect = 8e-19
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+ DQQRLIFAGKQ ED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 84.6 bits (200), Expect = 3e-17
Identities = 36/55 (65%), Positives = 47/55 (85%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI D EG+P DQ RLIFAGKQLED +T+ADYN+Q++STLH++LR RGG
Sbjct: 22 TIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGG 76
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKT E E
Sbjct: 1 MQIFLKTLTGKTKVLEVE 18
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 326 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 305 MQIFVKTLTGKTITLEVE 322
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 373
MQIF+KTLTGKTIT E E + K+ K+V + S ++ ++ LWP T
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 288
Query: 374 FKRNLLFTW 400
+R+LLFTW
Sbjct: 289 SRRSLLFTW 297
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 326 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 373
MQIF+KTLTGKTIT E E + K+ K+V + S ++ ++ LWP T
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 440
Query: 374 FKRNLLFTW 400
+R+LLFTW
Sbjct: 441 SRRSLLFTW 449
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 305 MQIFVKTLTGKTITLEVE 322
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 373
MQIF+KTLTGKTIT E E + K+ K+V + S ++ ++ LWP T
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 364
Query: 374 FKRNLLFTW 400
+R+LLFTW
Sbjct: 365 SRRSLLFTW 373
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 326 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 373
MQIF+KTLTGKTIT E E + K+ K+V + S ++ ++ LWP T
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 440
Query: 374 FKRNLLFTW 400
+R+LLFTW
Sbjct: 441 SRRSLLFTW 449
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 305 MQIFVKTLTGKTITLEVE 322
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 152
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 53.6 bits (123), Expect = 7e-08
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITI 373
MQIF+KTLTGKTIT E E + K+ K+V + S ++ ++ LWP T
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTT 364
Query: 374 FKRNLLFTW 400
+R+LLFTW
Sbjct: 365 SRRSLLFTW 373
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 153 MQIFVKTLTGKTITLEVE 170
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 229 MQIFVKTLTGKTITLEVE 246
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 69.3 bits (162), Expect = 1e-12
Identities = 31/55 (56%), Positives = 41/55 (74%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ +K+++ +KEG+P QQRLI+AGKQL D KT DY I+ S LH+VL LRGG
Sbjct: 98 TIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGG 152
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKE +P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 173 TIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 227
Score = 88.6 bits (210), Expect = 2e-18
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+AD NIQKESTLH+VLRLRGG
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGG 151
Score = 50.0 bits (114), Expect = 8e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLE 345
T+ ++K KI DKEG+P DQQRLIFAGKQLE
Sbjct: 249 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 278
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP 304
MQIF+KTLTGKTIT E E +G K+ K+ P
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIP 264
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 77 MQIFVKTLTGKTITLEVE 94
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 152 MQIFVKTLTGKTITLEVE 169
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 73.7 bits (173), Expect = 6e-14
Identities = 32/56 (57%), Positives = 43/56 (76%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGGY 423
T+ +K+++ +KEG+P QQRLI+AGKQL D KT DYNI+ S LH+VL LRGG+
Sbjct: 98 TIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 95.9 bits (228), Expect = 1e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 1 MQIFVKTLTGKTITLEVE 18
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 95.1 bits (226), Expect = 2e-20
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEGVP DQQRLIFAGKQL+D +T+ADYNIQKESTLH+VLRLRGG
Sbjct: 100 TIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGG 154
Score = 91.5 bits (217), Expect = 3e-19
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRL GG
Sbjct: 176 TTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 230
Score = 81.8 bits (193), Expect = 2e-16
Identities = 40/56 (71%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSK-TMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKE + DQQRLIFAG+QLED T+ADYNIQKESTLH+VLRLRGG
Sbjct: 252 TIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 81.4 bits (192), Expect = 3e-16
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI D EG+P+DQQRLIF+GK L+D +T+ADY+IQK+S LH+ LRLRGG
Sbjct: 24 TINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYSIQKDSILHLALRLRGG 78
Score = 34.7 bits (76), Expect = 0.033
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLTGKTIT E E
Sbjct: 79 MQIFVKTLTGKTITLEVE 96
Score = 32.7 bits (71), Expect = 0.13
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+ TLTGKTIT E E
Sbjct: 231 MQIFVNTLTGKTITLEVE 248
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKVCP 304
MQIF++TLT KTI E E + K+ K+ P
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIP 191
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 92.7 bits (220), Expect = 1e-19
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = +1
Query: 247 TRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T ++ ++K KI +KEG+P+DQQRLIFAGKQLED T+ADYNIQKESTLH+VLRLRGG
Sbjct: 21 TSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVLRLRGG 78
Score = 85.4 bits (202), Expect = 2e-17
Identities = 40/55 (72%), Positives = 47/55 (85%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI DKEG+ QQRLIFAGKQLED +T+ADYNIQKESTLH+VLRL GG
Sbjct: 100 TIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGG 154
Score = 70.1 bits (164), Expect = 7e-13
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 414
T+A++K+KI KEG+ DQQ LIF G+QLED T+ DY+I K+STL++VLRLR
Sbjct: 573 TIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 69.7 bits (163), Expect = 9e-13
Identities = 33/72 (45%), Positives = 47/72 (65%)
Frame = +1
Query: 205 HQNIDGQNHYRRNGTRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKE 384
+ + G+N + T+ ++K K+ DKE +P+D RLIFAGK LE +T+A YNIQK
Sbjct: 247 YNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKG 306
Query: 385 STLHMVLRLRGG 420
STL++V R R G
Sbjct: 307 STLYLVTRFRCG 318
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ +K KI DK G P DQQ L+F G QL+D +T+ DYNI+ ESTLH+ +R G
Sbjct: 414 TIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHG 468
Score = 65.3 bits (152), Expect = 2e-11
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ ++K KI K G+P+D+QRLIF G+ L S+T+ DYNIQK ST+H + RGG
Sbjct: 497 TIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGG 551
Score = 62.1 bits (144), Expect = 2e-10
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 2/56 (3%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQL--EDSKTMADYNIQKESTLHMVLRLRG 417
T+ ++K KI D+EG+ D QRLIF G++L ED++T+ADY I+ STL + LRLRG
Sbjct: 181 TIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRG 236
Score = 61.3 bits (142), Expect = 3e-10
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQ--QRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 414
T+ ++K + DKEG+ QRLIF GK+L+D T+ADY+IQKESTLH+VL ++
Sbjct: 340 TIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVLGMQ 394
Score = 34.7 bits (76), Expect = 0.033
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKK 295
MQIFIKTLTGKTI E E + +K+ +K+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKE 585
Score = 31.5 bits (68), Expect = 0.31
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF++TLTGKTIT E +
Sbjct: 79 MQIFVQTLTGKTITLEVK 96
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
MQIF+KTLT K I E E
Sbjct: 319 MQIFVKTLTRKRINLEVE 336
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 79.0 bits (186), Expect = 2e-15
Identities = 34/52 (65%), Positives = 43/52 (82%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRL 411
T+ ++K KI DK+G+PVDQQRLIF GKQLED T+ADYNIQ +S LH++ RL
Sbjct: 107 TIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 63.7 bits (148), Expect = 6e-11
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
T+ +K++I +KEG+P QR+++ GKQL D T YN+++ S LH+VL LRGG
Sbjct: 22 TIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 57.6 bits (133), Expect = 4e-09
Identities = 25/67 (37%), Positives = 43/67 (64%)
Frame = +1
Query: 208 QNIDGQNHYRRNGTRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 387
+ +D + + + TV K+KIA + GVPV QQRLIF G+ L+D +++Y+++
Sbjct: 29 KTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLENGH 88
Query: 388 TLHMVLR 408
TLH+++R
Sbjct: 89 TLHLIVR 95
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 402
TV K+ +A VP +QQRLI+ G+ L+D +T+ Y +Q + T+HMV
Sbjct: 39 TVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 402
TV K+ IA VP +QQRLI+ G+ L+D +T+ Y +Q + T+HMV
Sbjct: 39 TVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 44.0 bits (99), Expect = 5e-05
Identities = 19/53 (35%), Positives = 36/53 (67%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 414
TV L Q+I K +P +QR+I+ GKQL+ ++ Y+I+++++L +V R++
Sbjct: 117 TVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 43.6 bits (98), Expect = 7e-05
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
T+ LK I D+ G PVDQQ L G +L+++ T++DYNI+ ++ L
Sbjct: 162 TIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 43.2 bits (97), Expect = 9e-05
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Frame = +1
Query: 226 NHYRRNGTRRTVADLKQKIADKEGVPVDQQRLIFAGK-------------QLEDSKTMAD 366
N Y G+ T+ +LK K +KEG+PV+QQRLIF G+ ++ DS D
Sbjct: 62 NTYEVKGSD-TIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTID 120
Query: 367 YNIQKESTLHMVLRL 411
I E T +VLRL
Sbjct: 121 LKINGEPTRQLVLRL 135
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETE 247
M IFIKTLTG+T T E +
Sbjct: 50 MMIFIKTLTGRTNTYEVK 67
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 41.5 bits (93), Expect = 3e-04
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
TV ++K+KI +G+PV +Q L GK LED DY I ES L
Sbjct: 22 TVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESRL 67
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 211 NIDGQNHYRRNGTRRTVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADYNIQKES 387
N+ G+ G +V+ LK K + K + + ++ + GK+LED K++A+ N+Q S
Sbjct: 506 NLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQNVQPNS 565
Query: 388 TLHMV 402
+H++
Sbjct: 566 LVHLL 570
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 40.7 bits (91), Expect = 5e-04
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
TV +K+KI +G+PV +Q L GK LED DY I ES L
Sbjct: 22 TVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYMILFESLL 67
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 39.9 bits (89), Expect = 9e-04
Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQL-EDSKTMADYNIQKESTLHMVLRL 411
++A++K +I G V +Q+L+F+G++L ++ + DY + S LH+VL+L
Sbjct: 55 SIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGSVLHLVLKL 107
Score = 33.9 bits (74), Expect = 0.058
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +1
Query: 250 RRTVADLKQKIADK-EGVP-VDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 408
RR V LK++I+ + +G P VD Q ++F G++L+D++ + S +H++++
Sbjct: 130 RRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVK 184
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +1
Query: 259 VADLKQKIADKEGV-PVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 402
V DLKQ I GV P Q RL+F G+ L++ + ++DY++++ TL++V
Sbjct: 33 VRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHVEEGHTLYLV 81
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 217 DGQNHYRRNGTRRTVADLKQKIADKEGVPVDQQRLIFAGK---QLEDSKTMADYNIQKES 387
DG+ + T+AD+K KI D G+ Q L GK ++ TM DY I+
Sbjct: 9 DGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACD 68
Query: 388 TLHMVLRLRGG 420
HM R+RGG
Sbjct: 69 IFHMSDRMRGG 79
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKESTLHMVLRL 411
++ +K +I G V Q+L+F G++L S + M DY + + + LH+VL+L
Sbjct: 55 SIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKL 107
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 253 RTVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 408
R + +K++I+ K G V D+Q +++ G++LED + D +S LH+++R
Sbjct: 131 RNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKT-MADYNIQKESTLHMVLRL 411
++ +K +I G V Q+L+F G++L S + M DY + + + LH+VL+L
Sbjct: 55 SIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGNILHLVLKL 107
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 253 RTVADLKQKIADKEG--VPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLR 408
R + +K++I+ K G V D+Q +++ G++LED + D +S LH+++R
Sbjct: 131 RNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
V LK+KIA + +P ++Q+L L+D+ ++A YN+ L + LR RGG
Sbjct: 729 VGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At5g57860.3 68418.m07237 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHMVLR 408
TV D+KQK+ PV+ QRL+ + LEDSK++AD ++ ++ + + L+
Sbjct: 23 TVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVALTLK 75
>At5g57860.2 68418.m07236 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHMVLR 408
TV D+KQK+ PV+ QRL+ + LEDSK++AD ++ ++ + + L+
Sbjct: 23 TVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVALTLK 75
>At5g57860.1 68418.m07235 ubiquitin family protein contains Pfam
profile PF00240: Ubiquitin family
Length = 95
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQ--LEDSKTMADYNIQKESTLHMVLR 408
TV D+KQK+ PV+ QRL+ + LEDSK++AD ++ ++ + + L+
Sbjct: 23 TVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLADQKVENDAVVALTLK 75
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 244 GTRRTVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHM 399
G + TV K+KI + +PV +Q + F GK LED + +++I + LH+
Sbjct: 18 GLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWDILQNPLLHL 69
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 268 LKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
+KQ+I ++ +P QRLI G Q+ D ++ Q ++T+++VL LRGG
Sbjct: 35 IKQRIFEQTKIPTHLQRLISGGYQISDGSAIS----QPDATVNLVLSLRGG 81
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 36.7 bits (81), Expect = 0.008
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 202 IHQNIDGQNHYRRNGTRRTVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADYNIQ 378
I +++ G+ G +V+ L+ K + K + + ++ + GK+L+D K++A N+Q
Sbjct: 664 IVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQNVQ 723
Query: 379 KESTLHMV 402
S +H++
Sbjct: 724 PNSLVHLI 731
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 35.9 bits (79), Expect = 0.014
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +1
Query: 268 LKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 420
+KQ+I ++ +P QRLI G Q+ + ++ Q ++T+++VL LRGG
Sbjct: 35 IKQRIFEQTKIPTHLQRLISGGFQIPGASAIS----QSDTTMNLVLSLRGG 81
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 33.5 bits (73), Expect = 0.076
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 348
TV ++KQKI + +PV +Q L+F G L+D
Sbjct: 22 TVLEIKQKIEKYQRIPVSKQTLLFQGNVLQD 52
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
TV +K+KI +G PV +Q LIF K L+D M I+ S +
Sbjct: 23 TVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRI 68
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 32.7 bits (71), Expect = 0.13
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 393
TV +K+KI +G PV +Q LIF K L+D M I+ S +
Sbjct: 57 TVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQIRHNSRI 102
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 31.9 bits (69), Expect = 0.23
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 348
T +LK IA G+ +QRL+F GK+ ED
Sbjct: 100 TFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 31.5 bits (68), Expect = 0.31
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+ LLLI D+G + L +++ + DT TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIK 65
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 31.5 bits (68), Expect = 0.31
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+ LLLI D+G + L +++ + DT TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIK 65
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 348
T+ ++K+KI + +PV +Q LIF G L+D
Sbjct: 22 TMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At3g01050.1 68416.m00006 expressed protein
Length = 117
Score = 30.3 bits (65), Expect = 0.71
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 7/45 (15%)
Frame = +1
Query: 256 TVADLKQKIA-----DKEGVP--VDQQRLIFAGKQLEDSKTMADY 369
TV+ LK+ + +KE P V + +LI AGK LE+SKT+ DY
Sbjct: 30 TVSALKETVISEWPREKENGPKTVKEVKLISAGKVLENSKTVKDY 74
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 29.9 bits (64), Expect = 0.94
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 375
VA LK+KI+ + P ++Q+L L+D+ ++A YN+
Sbjct: 370 VASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At2g35360.1 68415.m04335 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 225
Score = 29.9 bits (64), Expect = 0.94
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 259 VADLKQKIADKEGVPVDQQRLIFAGKQLEDSK 354
+ DL+ IA+K PV R+I GK L+D +
Sbjct: 41 IRDLRNAIAEKGKFPVSTLRMILRGKALQDEE 72
>At1g24420.1 68414.m03077 transferase family protein similar to
deacetylvindoline 4-O-acetyltransferase [Catharanthus
roseus][GI:4091808][PMID:9681034],
acetyl-CoA:benzylalcohol acetyltranferase [Clarkia
concinna][GI:6166330][PMID:10588064]
Length = 436
Score = 29.1 bits (62), Expect = 1.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 54 YGRGNQLPLKGNNSWC 101
YGRGN++ L +NSWC
Sbjct: 349 YGRGNEMDLWMSNSWC 364
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 348
T +LK ++ G+ QQRL+F GK+ ED
Sbjct: 90 TFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 194 MQIFIKTLTGKTITAETEPAGRWPISSKKLPIKKV 298
M+IF+KTL+G E +PA + +S K I+ V
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADK--VSDVKTAIETV 33
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 208 QNIDGQNHYRRNGTRRTVADLKQKIADKEGVPVDQQRLIFAG 333
+N++G + R T+ +KQKI + +PV +Q LI G
Sbjct: 6 ENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g24610.1 68414.m03096 SET domain-containing protein low
similarity to SP|Q43088 Ribulose-1,5 bisphosphate
carboxylase/oxygenase large subunit N-
methyltransferase, chloroplast precursor (EC 2.1.1.127)
{Pisum sativum}; contains Pfam profile PF00856: SET
domain
Length = 476
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 155 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIK 48
+VP+ P++++CN P RII Q S ++K
Sbjct: 229 DVPMMLPLIDMCNHSFKPNARIIQEQNGADSNTLVK 264
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 152 VPLPPPMVELCNRR-PIPTPRIISLQRQLISTP 57
VPLPPP L RR P+P P L R+ P
Sbjct: 13 VPLPPPPPPLMRRRAPLPPPPPPPLMRRRAPPP 45
>At4g05240.1 68417.m00791 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 197
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 348
TV ++KQKI + + V +Q L F G L+D
Sbjct: 79 TVLEIKQKIEKYQRILVYRQTLFFQGNVLQD 109
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 402
TV DLK ++ V Q+LIF GK L ++ T+ ++ + L ++
Sbjct: 556 TVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLMLM 604
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 256 TVADLKQKIADKEGVPVDQQRLIFAGKQLED 348
T+ L+ ++A + G+ + +LIFAGK L+D
Sbjct: 22 TLNMLRDEVAKRSGLDPESIKLIFAGKILKD 52
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -1
Query: 402 HHVKSRFLLNIVIGHSFGIFQL--------FARKDKSLLIYGHTFFIGNFLLEI 265
H K +L IV+ F IFQ F ++++SL IYG ++F+ F+L I
Sbjct: 1760 HSGKRGIILEIVLALRFFIFQYGLVYQLSTFKQENQSLWIYGASWFVILFILLI 1813
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 202 IHQNIDGQNHYRRNGTRRTVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADYNIQ 378
IH+ G+ H +G ++ + +GVP +L +G+Q+ S+ + DY +Q
Sbjct: 21 IHREDVGEVHEEDDGMEDITKKYHNEVGEVVQGVP----QLRRSGRQISQSRYLEDYVMQ 76
Query: 379 KEST 390
E+T
Sbjct: 77 SETT 80
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = -1
Query: 195 IFTLLLINDNGCCECALASTDGGIVQQAADTXTTNYFPSTAIDFHARNQKLSGRRAR 25
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIK 65
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,289,581
Number of Sequences: 28952
Number of extensions: 221332
Number of successful extensions: 849
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 829097472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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