Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120956.seq
(634 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41481 Cluster: P18 protein; n=12; Nucleopolyhedrovirus... 132 5e-30
UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protei... 123 4e-27
UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e... 91 3e-17
UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep: ... 62 1e-08
UniRef50_Q0N420 Cluster: Ac93-like protein; n=3; Nucleopolyhedro... 58 1e-07
UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25... 55 1e-06
UniRef50_O71120 Cluster: ORF503; n=1; Trichoplusia ni granulovir... 40 0.038
UniRef50_Q6QXM2 Cluster: ORF82; n=2; Granulovirus|Rep: ORF82 - A... 37 0.46
UniRef50_Q8B4M7 Cluster: ORF92-like protein; n=1; Choristoneura ... 36 0.81
UniRef50_Q7T9T7 Cluster: ORF_78; n=1; Adoxophyes orana granulovi... 36 0.81
UniRef50_A6VUH6 Cluster: Putative uncharacterized protein; n=2; ... 36 1.1
UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium... 36 1.1
UniRef50_Q6LT25 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, who... 35 1.9
UniRef50_Q5KP57 Cluster: ER organization and biogenesis-related ... 35 1.9
UniRef50_Q91EW3 Cluster: ORF92 similar to AcMNPV ORF93; n=3; Gra... 34 2.5
UniRef50_A5IZT4 Cluster: Putative uncharacterized protein orf82;... 34 2.5
UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, wh... 34 3.3
UniRef50_Q60BI8 Cluster: Conserved domain protein; n=1; Methyloc... 33 5.7
UniRef50_A4C818 Cluster: Putative Bacterial chemotaxis sensory t... 33 7.5
UniRef50_A2DAD9 Cluster: Ankyrin repeat protein, putative; n=1; ... 33 7.5
UniRef50_Q974I1 Cluster: Putative uncharacterized protein ST0677... 33 7.5
UniRef50_Q7MZW3 Cluster: Complete genome; segment 14/17; n=2; Ph... 32 10.0
UniRef50_A6KZV8 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
>UniRef50_P41481 Cluster: P18 protein; n=12;
Nucleopolyhedrovirus|Rep: P18 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 161
Score = 132 bits (320), Expect = 5e-30
Identities = 63/63 (100%), Positives = 63/63 (100%)
Frame = +2
Query: 11 VDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIE 190
VDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIE
Sbjct: 99 VDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLNLIGIE 158
Query: 191 IVN 199
IVN
Sbjct: 159 IVN 161
>UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protein
E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E25 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 229
Score = 123 bits (296), Expect = 4e-27
Identities = 59/117 (50%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Frame = +3
Query: 255 LYWTNALNLNSLTEASPSLGQSSESVESD-ENKRLNVKLNNARVANLRIAHGDNKLSQMY 431
L++ LNLNSLTE+SPSL QSS+SV+ D + ++LNVKL N ++ +R+AHGDNK+SQ+Y
Sbjct: 17 LWYNGKLNLNSLTESSPSLAQSSDSVQVDPQTEQLNVKLGNNKMTYMRVAHGDNKVSQVY 76
Query: 432 IAEKPLSIDDIVKEGSNKVGTNSIFLAPYTTMELNRQTRPAHLVMWTMTRGTANFDI 602
+AEKP+S+DDI K+G+ +VG NS+F+ + P T+TR TANFD+
Sbjct: 77 VAEKPMSMDDIEKQGNARVGANSLFIGTVYDQGVRSPNAPGASNDVTVTRTTANFDV 133
>UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e25
- Helicoverpa armigera NPV
Length = 230
Score = 90.6 bits (215), Expect = 3e-17
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Frame = +3
Query: 255 LYWTNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYI 434
LY N LN +SL ++S GQSSES+ + +L +K N+ R+ +RI HGDNK+S++ +
Sbjct: 18 LYTNNKLNFDSLNDSS---GQSSESIRENNQGQLTLKFNSPRIKTMRILHGDNKISKVCV 74
Query: 435 AEKPLSIDDIVKEGSNKVGTNSIFLA----PYTTMELNRQTR----PAHLVMWTMTRGTA 590
AE+PL+ +I+ EG+ VG N +F+ P T LN+Q + + T R TA
Sbjct: 75 AERPLTYSEIIDEGNRTVGANCVFMGTISEPSQTSTLNQQQQQQQSAGSSLPTTANRVTA 134
Query: 591 NFDI 602
NFDI
Sbjct: 135 NFDI 138
>UniRef50_Q0IL20 Cluster: ORF99; n=14; Nucleopolyhedrovirus|Rep:
ORF99 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 168
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +2
Query: 11 VDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVP--VNWENDNLSVLLKHLHNLNLIG 184
+D+SA+ +NV+ CE +T +F++FT S+IVV +P VN++ DNLS LL HL ++I
Sbjct: 104 IDDSAWAANVLESCETLVTYMFKLFTDRSQIVVIIPPEVNYQEDNLSALLNHLLQQSIIS 163
Query: 185 IEI 193
+E+
Sbjct: 164 LEL 166
>UniRef50_Q0N420 Cluster: Ac93-like protein; n=3;
Nucleopolyhedrovirus|Rep: Ac93-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 171
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Frame = +2
Query: 11 VDESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVP--VNWENDNLSVLLKHLHNLNLIG 184
VDESAFG++++ C ++T IF +F L S+I+V +P N DNLS +LKHL ++I
Sbjct: 110 VDESAFGNDILESCVDYVTNIFRLFRLQSRIIVVLPPHANLAQDNLSEVLKHLLQQSVIE 169
Query: 185 I 187
I
Sbjct: 170 I 170
>UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25 -
Adoxophyes orana granulovirus (AoGV)
Length = 217
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 LYWTN-ALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMY 431
L W N LN NSL +S S G +S++ NV NN + N+RIA+G+N S++
Sbjct: 17 LLWVNDKLNANSLNTSSESSG---DSIQFTPEGNANVIFNNTKSKNVRIAYGENNFSKIV 73
Query: 432 IAEKPLSIDDIVKEGSNKVGTNSIFL 509
E P+ + I++ G +K G N+I L
Sbjct: 74 ALETPIRHEQIIEHG-DKAGANTICL 98
>UniRef50_O71120 Cluster: ORF503; n=1; Trichoplusia ni
granulovirus|Rep: ORF503 - Trichoplusia ni granulosis
virus (TnGV) (Trichoplusia nigranulovirus)
Length = 68
Score = 40.3 bits (90), Expect = 0.038
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDN-LSVLLKHLHNLNLIGIE 190
D SAFG + + C + +++++F +S IVV V + + +N + VLL+ L + NL+ I+
Sbjct: 4 DRSAFGQDCVAQCIDIVYSVYQVFNRTSDIVVNVKQDIDANNVVYVLLEGLRSSNLVDIQ 63
Query: 191 IV 196
V
Sbjct: 64 KV 65
>UniRef50_Q6QXM2 Cluster: ORF82; n=2; Granulovirus|Rep: ORF82 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 167
Score = 36.7 bits (81), Expect = 0.46
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWE-NDNLSVLLKHLHNLNLIGIE 190
+++AFG+ C + + ++E+F+ ++ IVV + + D +++LL HL I E
Sbjct: 93 EDTAFGNECAQLCLEIVQLMYELFSCTTNIVVLIESEADPEDEINLLLAHLERSKYIATE 152
Query: 191 IV 196
V
Sbjct: 153 KV 154
>UniRef50_Q8B4M7 Cluster: ORF92-like protein; n=1; Choristoneura
fumiferana granulovirus|Rep: ORF92-like protein -
Choristoneura fumiferana granulovirus (CfGV)
Length = 140
Score = 35.9 bits (79), Expect = 0.81
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 17 ESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKH-LHNLNLI 181
ESAF ++ C++ + +FE+F + I V + + +DN+ V+L H L L L+
Sbjct: 76 ESAFDIDLKVLCQEIVCTLFELFNCVTDITVYLKADLNDDNVIVILLHELQALELV 131
>UniRef50_Q7T9T7 Cluster: ORF_78; n=1; Adoxophyes orana
granulovirus|Rep: ORF_78 - Adoxophyes orana granulovirus
(AoGV)
Length = 164
Score = 35.9 bits (79), Expect = 0.81
Identities = 15/58 (25%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 17 ESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNW-ENDNLSVLLKHLHNLNLIGI 187
+S+F + ++ ++ ++ FE+F+ SK++V V + E+ N+ LL+ + + N+I +
Sbjct: 101 DSSFDNKIVEMTQELVSISFELFSCMSKVIVYVRYDADESHNIMGLLRKIESRNIINV 158
>UniRef50_A6VUH6 Cluster: Putative uncharacterized protein; n=2;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Marinomonas sp. MWYL1
Length = 199
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +3
Query: 198 IKTNHVENRVIDRFARTDLLYWTNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNA 377
I T ++ + D F + +LY+ +AL+ N ++ L +S+ ++ +KR +VKLN
Sbjct: 88 IATQKIDASLGDSFNKALVLYYLHALSSNRFSQNDLGLLLTSDLAKAKASKRFSVKLNEK 147
Query: 378 RVANLRIAHGDNKL 419
+ ++ KL
Sbjct: 148 SINEIKSLMASQKL 161
>UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium
falciparum 3D7|Rep: Ser/Thr protein kinase - Plasmodium
falciparum (isolate 3D7)
Length = 4044
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +3
Query: 300 SPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGS 479
S S+ + +E K +N +NN++ + ++ +NK+ M + +S+ D++K
Sbjct: 3017 SNSINMKEKMSRINETKNINENINNSKNIS-EMSETNNKMDNMETRKNTISLQDVIKNNL 3075
Query: 480 NKVGTNSIFLAP 515
N + N L P
Sbjct: 3076 NNLQKNRKMLLP 3087
>UniRef50_Q6LT25 Cluster: Putative uncharacterized protein; n=2;
Photobacterium profundum|Rep: Putative uncharacterized
protein - Photobacterium profundum (Photobacterium sp.
(strain SS9))
Length = 3399
Score = 34.7 bits (76), Expect = 1.9
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +3
Query: 297 ASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDD-IVKE 473
AS SLG ++ DE +L+VKL N N + D Q + ++IDD I K+
Sbjct: 1200 ASSSLGYFNDVAIQDEISKLSVKLLNGGEGNPFATYDDPTHPQFTV---DVAIDDAIPKD 1256
Query: 474 GSNKVGTNSIFLAPYTTMELNRQTRPAHLVMWTMTRGTANFDIXG 608
G + GT + T + P V++T+T GT D G
Sbjct: 1257 GGSTDGTLDGVVKANTDLNTIIDVTPNDKVVYTIT-GTVRDDAIG 1300
>UniRef50_A0BC37 Cluster: Chromosome undetermined scaffold_1, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_1,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 273
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +2
Query: 14 DESAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWENDNLSVLLKHLHNLN 175
+E+ F SN+ NY Q I I E TLS KI E D LL++L ++N
Sbjct: 191 EETKFTSNIQNYGRQLIETIEEQVTLSDKINSNTANKKEGDKQPELLEYLISMN 244
>UniRef50_Q5KP57 Cluster: ER organization and biogenesis-related
protein, putative; n=2; Filobasidiella neoformans|Rep:
ER organization and biogenesis-related protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 836
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLN-NARVANLRIAHGDNKLSQMYIAE 440
T A ++N + A L ++++++E++E RL K N +A++AN + N L + +
Sbjct: 707 TPAADVNR-SAAVADLRKAAQALEAEEEARLFHKDNVDAKIANWKSGKETN-LRALIASL 764
Query: 441 KPLSIDDIVKEGSNKVGTNSI 503
+ DDIVKEG KVG + +
Sbjct: 765 DTVLWDDIVKEGGLKVGMHEL 785
>UniRef50_Q91EW3 Cluster: ORF92 similar to AcMNPV ORF93; n=3;
Granulovirus|Rep: ORF92 similar to AcMNPV ORF93 - Cydia
pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 161
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 17 ESAFGSNVINYCEQFITAIFEIFTLSSKIVVAV--PVNWENDNLSVLLKHLHNLNLI 181
+SAF +++ C + + FE+F+ ++ IVV V N++++ L+ LL L + N I
Sbjct: 97 QSAFDIDLMQTCREIVYLTFELFSCAANIVVFVHASANYKDNVLAQLLVELQSKNFI 153
>UniRef50_A5IZT4 Cluster: Putative uncharacterized protein orf82;
n=1; Spodoptera litura granulovirus|Rep: Putative
uncharacterized protein orf82 - Spodoptera litura
granulovirus
Length = 155
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 20 SAFGSNVINYCEQFITAIFEIFTLSSKIVVAVPVNWE-NDNLSVLLKHLHNLNLIGI 187
SAFG +N C + ++E+F+ + I V V + + +D+L +LL +L + I I
Sbjct: 96 SAFGKECVNACLDIVCCMYELFSFIADINVYVRADTDPDDDLFILLTYLQSSEYITI 152
>UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1155
Score = 33.9 bits (74), Expect = 3.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 267 NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKL 419
N + N L E + + Q + +++ E +R KLNN NL+I + +NKL
Sbjct: 544 NLIQQNKLQEQNVQIQQLTVQIQNMEEQRNEFKLNNQIFQNLKIKYVNNKL 594
>UniRef50_Q60BI8 Cluster: Conserved domain protein; n=1;
Methylococcus capsulatus|Rep: Conserved domain protein -
Methylococcus capsulatus
Length = 138
Score = 33.1 bits (72), Expect = 5.7
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Frame = +3
Query: 225 VIDRFARTDLLYWTNALNLNSLTEASPSL-GQSSESVESDE---NKRLNVKLNNARVANL 392
+ +R+ R L W N + +L + +L GQ+ V E +RL + ARV L
Sbjct: 8 IAERYKRAKLQPWRNCIETFTLLDLIGNLSGQAVVDVACGEAFYTRRLRAQ-GAARVLGL 66
Query: 393 RIAHGDNKLSQMYIAEKPLSIDDIVKEGSN 482
++ +L++ AE+PL ID V +G N
Sbjct: 67 DLSERMVELAREQEAEQPLGIDYRVGDGKN 96
>UniRef50_A4C818 Cluster: Putative Bacterial chemotaxis sensory
transducer; n=3; Alteromonadales|Rep: Putative Bacterial
chemotaxis sensory transducer - Pseudoalteromonas
tunicata D2
Length = 406
Score = 32.7 bits (71), Expect = 7.5
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Frame = +3
Query: 264 TNALNLNSLTEASPSLGQSSE--SVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIA 437
TN L LN+ EA+ + G++ +V +DE + L+VK+NN A +I+ NK++ + +
Sbjct: 251 TNLLALNAAIEAARA-GEAGRGFAVVADEVRSLSVKVNN---ATRQISEFINKMNHL-VG 305
Query: 438 EKPLSIDDIVKEGSNK----VGTNSIFLAPYTTMELNRQ 542
E D ++K+ S+ T+++F E N+Q
Sbjct: 306 ETNQESDKLIKQSSDVEQAIAETSTVFADMVIEFENNQQ 344
>UniRef50_A2DAD9 Cluster: Ankyrin repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
putative - Trichomonas vaginalis G3
Length = 456
Score = 32.7 bits (71), Expect = 7.5
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 177 SLELKL*IKTNHVENRVIDRFARTDLLYWTNALNLNSLTEASPSLGQSSESVESDENKRL 356
S+E L + NH + ++ DRF R L+ A N + E G +S++ L
Sbjct: 277 SVEACLTLLLNHADQKLTDRFGRIP-LHEAAANNATEVAEILIKYGAIVDSLDCFGATPL 335
Query: 357 N--VKLNNARVANLRIAHG 407
+ K NN ++A L ++HG
Sbjct: 336 HEAAKNNNVKIAELLLSHG 354
>UniRef50_Q974I1 Cluster: Putative uncharacterized protein ST0677;
n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
protein ST0677 - Sulfolobus tokodaii
Length = 195
Score = 32.7 bits (71), Expect = 7.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -1
Query: 577 VMVHITRCAGRVWRFNSIVVYGARKMLLVPTLLEPSLTMSSIDSGFSAIYIWLNLLS 407
+ V I +GRV+ + ++ GA +P P++T I S FSA W+ LL+
Sbjct: 66 IKVSIPDYSGRVFLASGVIPLGANPCSYLPQSFLPNITPPVIYSSFSAKTFWVMLLN 122
>UniRef50_Q7MZW3 Cluster: Complete genome; segment 14/17; n=2;
Photorhabdus luminescens|Rep: Complete genome; segment
14/17 - Photorhabdus luminescens subsp. laumondii
Length = 1227
Score = 32.3 bits (70), Expect = 10.0
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = -1
Query: 586 VPRVMVHITRCAGRVWRFNSIVVYGARKMLLVPTLLE--PSLTMSS-IDSGFSAIYIWLN 416
+PR+ I AGR+ RFN + + +++ +E PS+ ++S +D+ +A Y
Sbjct: 513 LPRLCKAIPTLAGRLTRFNDLCL--IMQLIKTEAWIEKLPSIQLTSLVDAAITAPYSDAR 570
Query: 415 LLSPCAMRKLATRALLS 365
LL C + LA +LS
Sbjct: 571 LLLECILHVLADTEILS 587
>UniRef50_A6KZV8 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 438
Score = 32.3 bits (70), Expect = 10.0
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 312 GQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVG 491
G S S++ +N ++ +KL AR + IA L + YI K S+DD++ N
Sbjct: 68 GSCSASLKMTDNAQIEMKLPPARYTIVAIAG----LGEEYIVPKDPSLDDVIVMKENNRS 123
Query: 492 TNSIFLAPYTTMELNRQ 542
+ ++ + T N++
Sbjct: 124 SRALMMGTSTVTIANKK 140
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,521,713
Number of Sequences: 1657284
Number of extensions: 11765483
Number of successful extensions: 30568
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30559
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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