Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120956.seq
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 474 GSNKVGTNSIFLAP 515
           G+N++GT  IFLAP
Sbjct: 492 GNNRMGTCRIFLAP 505


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 15/59 (25%), Positives = 27/59 (45%)
 Frame = +3

Query: 435 AEKPLSIDDIVKEGSNKVGTNSIFLAPYTTMELNRQTRPAHLVMWTMTRGTANFDIXGI 611
           AE   S    V+E  N++  ++   A    +E +    P   ++W  + GTA  D+ G+
Sbjct: 16  AEDDTSGPVFVREPPNRIDFSNTTGA---VVECSAHGNPTPDIIWVRSDGTAVGDVPGL 71


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory
          receptor candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 21 LRSAATLLTIANSLSRPFSK 80
          L +  TLL I +S+ RP+ K
Sbjct: 30 LLTTLTLLVILSSIDRPYLK 49


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 405 GDNKLSQMYIAEKPLSIDDIV 467
           G  KLS+MY     LSI D++
Sbjct: 68  GRKKLSRMYFFILHLSIADLI 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,681
Number of Sequences: 336
Number of extensions: 2925
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)