Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120956.seq
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   2.0  
Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL...    24   3.5  
L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   3.5  
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   3.5  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   3.5  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 2   GTRVDESAFGSNVINYCEQFITAIFEIFTLSSKIVVA-VPVNWENDNLSVL 151
           GTR  +S  G  V     Q       I+ L   + VA V +NW  DNL ++
Sbjct: 289 GTRCVQSTHGL-VTTVAYQMGRNAPPIYALEGSVAVAGVAMNWLRDNLKII 338


>Z69976-1|CAA93816.1|  204|Anopheles gambiae ribosomal protein RL10
           protein.
          Length = 204

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +2

Query: 419 EPNVYCRKTAIYRRHSQRGLQQSGH*QHFSGTVYDYGVK---SPNAASTSSNVDHDARHR 589
           +PNV     A+++    RGL  +G      G  Y Y      S  AA    N  H  R+R
Sbjct: 145 DPNVNWICNAVHKHRELRGLTSAGKSSRGLGKAYRYSQTIGGSRRAAGVRRNRLHLRRYR 204


>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 30  AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 122
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 30  AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 122
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 424 WLNLLSPCAMRKLATRALLSFTFNRLFSSDSTDSLLCPK 308
           WL   S  A++K A+   +S  F+R+   D      CP+
Sbjct: 100 WLVTASQSALQKFASTDWMSNPFDRVVCGDFAGPNGCPR 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,285
Number of Sequences: 2352
Number of extensions: 12971
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)