Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120956.seq
         (634 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.3  
BT029978-1|ABM92852.1|  178|Drosophila melanogaster IP18377p pro...    30   3.0  
BT029974-1|ABM92848.1|  178|Drosophila melanogaster IP18177p pro...    30   3.0  
BT029969-1|ABM92843.1|  178|Drosophila melanogaster IP18077p pro...    30   3.0  
AE013599-3447|AAF46888.2|  464|Drosophila melanogaster CG30259-P...    30   3.0  
AE014296-1180|AAF50620.1|  434|Drosophila melanogaster CG8641-PA...    29   5.2  

>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
            protein.
          Length = 1489

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 294  EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 470
            E  P + ++    ESD+ +R L+ ++ + R    R  H  +K +   + E   S  D  +
Sbjct: 1287 EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDEAEKSGSDHEE 1346

Query: 471  EGSNKVGT 494
            EG   +GT
Sbjct: 1347 EGETTIGT 1354


>BT029978-1|ABM92852.1|  178|Drosophila melanogaster IP18377p
           protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 294 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 470
           E  P + ++    ESD+ +R L+ ++ + R    R  H  +K +   + +   S  D  +
Sbjct: 41  EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDDAEKSGSDHEE 100

Query: 471 EGSNKVGT 494
           EG   +GT
Sbjct: 101 EGETTIGT 108


>BT029974-1|ABM92848.1|  178|Drosophila melanogaster IP18177p
           protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 294 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 470
           E  P + ++    ESD+ +R L+ ++ + R    R  H  +K +   + +   S  D  +
Sbjct: 41  EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDDAEKSGSDHEE 100

Query: 471 EGSNKVGT 494
           EG   +GT
Sbjct: 101 EGETTIGT 108


>BT029969-1|ABM92843.1|  178|Drosophila melanogaster IP18077p
           protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 294 EASPSLGQSSESVESDENKR-LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK 470
           E  P + ++    ESD+ +R L+ ++ + R    R  H  +K +   + +   S  D  +
Sbjct: 41  EQKPQIAETQVDCESDDYERILDTQMPDPRKTPTRPRHKRSKFNSFILDDAEKSGSDHEE 100

Query: 471 EGSNKVGT 494
           EG   +GT
Sbjct: 101 EGETTIGT 108


>AE013599-3447|AAF46888.2|  464|Drosophila melanogaster CG30259-PA
           protein.
          Length = 464

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +3

Query: 279 LNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSI 455
           +N++      L Q    +E+ EN +L  +L +  V NL IA+G N     Y+A +P S+
Sbjct: 339 VNNVAVDVACLKQQKRRLEA-ENSQLKTQLQDYLV-NLNIANGSNSHVHSYLARRPKSM 395


>AE014296-1180|AAF50620.1|  434|Drosophila melanogaster CG8641-PA
           protein.
          Length = 434

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
 Frame = -2

Query: 399 RCANWPPGRY*ALRLI-VCSRLIPPIRCSALNWATPRLRNLNLMHSSN-RVNQYEQNDQ 229
           RC NW   R      + V     PPI  SA    TP  RN +  +++N R N  + N Q
Sbjct: 3   RCKNWFCARSNNNNYVDVALSEAPPIHPSAATTTTPNSRNFSASNNNNVRSNSSKSNQQ 61


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,224,996
Number of Sequences: 53049
Number of extensions: 542100
Number of successful extensions: 1404
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)