Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120955.seq
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    27   0.66 
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   6.1  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   8.1  

>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 94  CAIFL*-LDLRQSVFFVHKTRHVRAICQRMQKSNHRIAPRGSRARVEYFE 240
           CA++   LDL+ S   V +  H    C R  +   ++ P    AR+ + E
Sbjct: 6   CALYKQELDLQVSAKTVSRRLHAAGFCARRPRKVRKLLPHHVEARIRFAE 55


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
 Frame = +1

Query: 172 QRMQKSNHRIAPRGSR---ARVEYFERAMQRFSTAANGNRLLLPFKNFMIKMGRNTNMKK 342
           +RM+    +I P   +     + YF  AM       + N  + P      K   +TN K 
Sbjct: 193 RRMELEKQKIRPTNKKFTGPTIRYFSTAMPIIEEVYDSNTEVDPLSISDPKEAEDTNDKT 252

Query: 343 VNKIASTVLIGFYLRHYL 396
             K     + G Y R ++
Sbjct: 253 SKKTTLMEVTGQYERTFI 270


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 423 GSGVGTPQRLSFHHEQVFGRKH 488
           GSG  + QR  FHH     + H
Sbjct: 15  GSGASSSQRSPFHHHHQQQQNH 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,606
Number of Sequences: 2352
Number of extensions: 13015
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)