SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120953.seq
         (628 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo...   145   9e-34
UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7; Nucleopo...   101   1e-20
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh...    94   3e-18
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV...    53   6e-06
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh...    51   3e-05
UniRef50_Q77K64 Cluster: Cg30 protein; n=3; Nucleopolyhedrovirus...    50   5e-05
UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis bil...    48   1e-04
UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: C...    48   1e-04
UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum nucleopolyhe...    47   4e-04
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP...    46   0.001
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh...    44   0.003
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ...    40   0.049
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph...    40   0.049
UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura granulov...    38   0.20 
UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum granulovir...    38   0.26 
UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|R...    38   0.26 
UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG...    37   0.45 
UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, wh...    36   0.79 
UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1; ...    35   1.4  
UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12...    34   2.4  
UniRef50_Q3ZJ93 Cluster: DNA-directed RNA polymerase subunit bet...    33   5.6  
UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4...    33   7.4  
UniRef50_UPI00015B4C60 Cluster: PREDICTED: similar to ring finge...    32   9.8  
UniRef50_A0DI49 Cluster: Chromosome undetermined scaffold_51, wh...    32   9.8  
UniRef50_Q2H492 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
           Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
           Bombyx mori nuclear polyhedrosis virus (BmNPV)
          Length = 266

 Score =  145 bits (351), Expect = 9e-34
 Identities = 65/78 (83%), Positives = 67/78 (85%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 459
           MEFVKLQCNICFSVAEIKNYFMQPIDRLT+IPVLELDTCKHQLCSMC          PCP
Sbjct: 1   MEFVKLQCNICFSVAEIKNYFMQPIDRLTMIPVLELDTCKHQLCSMCIRKIRKRKKTPCP 60

Query: 460 LCRVESLHFNVYSINRTL 513
           LCRVESLHFNVYSINR +
Sbjct: 61  LCRVESLHFNVYSINRNV 78



 Score = 74.9 bits (176), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 36/40 (90%)
 Frame = +3

Query: 507 NVVDVIKCSVTSVAQWNKINXNFDAXFWASVLFEKSLLDD 626
           NVVDVIKCSVTSVAQWNKIN NFDA   ASVLFEKSLLDD
Sbjct: 77  NVVDVIKCSVTSVAQWNKINGNFDAASLASVLFEKSLLDD 116


>UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7;
           Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
           Orgyia pseudotsugata multicapsid polyhedrosis virus
           (OpMNPV)
          Length = 249

 Score =  101 bits (243), Expect = 1e-20
 Identities = 43/79 (54%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC---XXXXXXXXXX 450
           M+ V+LQC+IC SV EIKNYF+QP+D +TI+P++EL TC+HQLC MC             
Sbjct: 1   MDTVRLQCHICCSVGEIKNYFLQPVDAITILPIVELHTCRHQLCVMCVRKIAQRGRDKRV 60

Query: 451 PCPLCRVESLHFNVYSINR 507
            CP+CR ++ HFNVYS+NR
Sbjct: 61  ECPMCRRKNAHFNVYSVNR 79



 Score = 32.7 bits (71), Expect = 7.4
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +3

Query: 507 NVVDVIKCSVTSVAQWNKINXNFDAXFWASVLFEKSLLD 623
           N VDV++CSV  V +  +     DA   A  LFE SLL+
Sbjct: 80  NSVDVLRCSVADVREHGRFGGLADAASLARGLFEPSLLE 118


>UniRef50_P17500 Cluster: Major capsid protein; n=15;
           Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
           pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
          Length = 351

 Score = 93.9 bits (223), Expect = 3e-18
 Identities = 42/58 (72%), Positives = 51/58 (87%), Gaps = 1/58 (1%)
 Frame = +3

Query: 3   KSQPNRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLR-NDFI 173
           K++PNRLQIRNVLKFEGDTR L+RTL  YEEYP YVPLFLGYQ++N +N+ LR N+F+
Sbjct: 259 KTRPNRLQIRNVLKFEGDTRALERTLGRYEEYPMYVPLFLGYQLVNLQNDILRANNFL 316


>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
           MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
          Length = 461

 Score = 52.8 bits (121), Expect = 6e-06
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 453
           ME + L C++C S  EIK  F     ++ ++P+  LD CKH LC MC             
Sbjct: 1   MESITLGCSVCMSEVEIKAGFGDVDPQMFVVPLFILDECKHVLCLMCCKSIQDGRRRAIT 60

Query: 454 CPLCRVES 477
           CP CRV S
Sbjct: 61  CPTCRVSS 68


>UniRef50_P35840 Cluster: Major capsid protein; n=12;
           Nucleopolyhedrovirus|Rep: Major capsid protein -
           Lymantria dispar multicapsid nuclear polyhedrosis virus
           (LdMNPV)
          Length = 356

 Score = 50.8 bits (116), Expect = 3e-05
 Identities = 22/47 (46%), Positives = 31/47 (65%)
 Frame = +3

Query: 15  NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNF 155
           N L + NVLKF+G+   L ++LS YE YP  VPL LG Q +N+ + +
Sbjct: 254 NVLHVENVLKFKGNANALQKSLSRYEPYPIVVPLMLGTQTLNTSSAY 300


>UniRef50_Q77K64 Cluster: Cg30 protein; n=3;
           Nucleopolyhedrovirus|Rep: Cg30 protein - Helicoverpa
           armigera NPV
          Length = 283

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 459
           M  + + C +C   A I N   Q    L ++P++ L +C H LC+MC           CP
Sbjct: 1   MNSITVNCCVCLGRATIYNNDQQ---ELLVLPLIVLQSCLHALCTMCLKRMRKSLIVKCP 57

Query: 460 LCRVESLHFNVYSIN 504
           LCR  ++ ++ Y I+
Sbjct: 58  LCRSINIKYSYYCIS 72


>UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis
           bilineata nucleopolyhedrosis virus|Rep: Cg30/ac88-like
           protein - Clanis bilineata nucleopolyhedrosis virus
          Length = 346

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 21/75 (28%), Positives = 37/75 (49%)
 Frame = +1

Query: 283 EFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPL 462
           E V L C +C S + I +   +  D +   P+ +L +C H +C +C           CPL
Sbjct: 39  EQVTLSCCVCLSESTINDTKDELDDNMFAFPLAQLVSCLHSICVVCAVSLKQRQVISCPL 98

Query: 463 CRVESLHFNVYSINR 507
           CR +S    ++++N+
Sbjct: 99  CRTQSNKLVLFNVNK 113


>UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: Cg30
           - Ecotropis obliqua NPV
          Length = 269

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTII-PVLELDTCKHQLCSMCXXXXXXXXXXPC 456
           M  V L CNIC+S+ +I++        +  I P+  L  C H LC  C           C
Sbjct: 1   MTSVTLNCNICYSLTKIESVPSSNTKNVMYIYPLTVLSMCLHTLCFTCVSKLAKGKELKC 60

Query: 457 PLCRVESLHFNVYSINR 507
           P CR  +    V+++NR
Sbjct: 61  PFCRTINTKVRVHAVNR 77


>UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum
           nucleopolyhedrovirus|Rep: CG30 - Agrotis segetum nuclear
           polyhedrosis virus (AsNPV)
          Length = 453

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 453
           ME V L C +C +   +K       + L I+P L L  C H LC  C             
Sbjct: 8   MESVTLNCGVCLTDVLVKANETTRKENLYIVPFLSLIECNHALCVHCVKNLQTSNRRAIS 67

Query: 454 CPLCRVESLHFNVYSIN 504
           CP+CR  S  F + SIN
Sbjct: 68  CPMCREVSTKFRLISIN 84


>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
           - Spodoptera litura multicapsid nucleopolyhedrovirus
           (SpltMNPV)
          Length = 302

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 22/42 (52%), Positives = 30/42 (71%)
 Frame = +3

Query: 15  NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIIN 140
           N L+IRNV++F G++  L++ L+ YE YP  V LFLG Q IN
Sbjct: 250 NVLEIRNVIQFIGNSDALNKKLARYECYPLVVQLFLGSQTIN 291


>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
           nucleopolyhedrosis virus
          Length = 350

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 21/40 (52%), Positives = 25/40 (62%)
 Frame = +3

Query: 15  NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQI 134
           N LQI NVLKF G+   L + L+ Y+ Y   VPL LG QI
Sbjct: 255 NVLQIENVLKFRGNANALQKNLNRYDPYSLEVPLMLGTQI 294


>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
           NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
          Length = 325

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 21/61 (34%), Positives = 33/61 (54%)
 Frame = +3

Query: 15  NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNA 194
           N LQI  V +F+G+   L   LS YE YP  VPL +G +++ + + + +  +    NP  
Sbjct: 252 NILQIDYVPRFQGNAVALQTNLSRYEHYPLVVPLMVGNEVLITRDTYKKPPY---PNPTL 308

Query: 195 T 197
           T
Sbjct: 309 T 309


>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
           honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
           honmai nucleopolyhedrovirus
          Length = 312

 Score = 39.9 bits (89), Expect = 0.049
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = +3

Query: 15  NRLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 137
           N L+I NVLKF+G+   L  +L  Y++Y   VPL LG   I
Sbjct: 255 NILRIENVLKFQGNANALQLSLGKYDQYRIEVPLILGKDTI 295


>UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura
           granulovirus|Rep: Cg30-2 - Spodoptera litura
           granulovirus
          Length = 360

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +1

Query: 286 FVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLC 465
           F  L+C +C +  E    F+   + + +IP+L +  C H LC+ C           CP C
Sbjct: 4   FTILKCPVCLNKCEAD--FVSE-NTVKLIPMLTIAECNHHLCAACLYSIANNYEITCPTC 60

Query: 466 R 468
           R
Sbjct: 61  R 61


>UniRef50_Q6QXM6 Cluster: ORF086; n=1; Agrotis segetum
           granulovirus|Rep: ORF086 - Agrotis segetum granulosis
           virus (AsGV) (Agrotis segetumgranulovirus)
          Length = 292

 Score = 37.5 bits (83), Expect = 0.26
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 18  RLQIRNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 137
           R Q+R V++FEG        L GYE Y    PL+LG ++I
Sbjct: 252 RFQVRTVVEFEGRATRRQEGLQGYEVYVVNRPLWLGTEVI 291


>UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|Rep:
           Cg30 - Spodoptera frugiperda nuclear polyhedrosis virus
           (SfNPV)
          Length = 458

 Score = 37.5 bits (83), Expect = 0.26
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 459
           M+ V +QC +C     I +     ++ + ++P L+L+ C H +C  C           CP
Sbjct: 1   MDLVTIQCIVCLVETTIDH---TKVEEVFVVPFLKLNNCNHVMCVDC--IKNMTTPLSCP 55

Query: 460 LCRVESL 480
           +CR  S+
Sbjct: 56  VCRRVSI 62


>UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG30
           - Mamestra configurata NPV-A
          Length = 279

 Score = 36.7 bits (81), Expect = 0.45
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC 420
           M+ V +QCNIC     +K       D + I+P+L L  C H  C  C
Sbjct: 1   MKSVTIQCNICLEQVVVKK--PDDEDFMYIVPLLTLTACNHHYCVEC 45


>UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_10,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 222

 Score = 35.9 bits (79), Expect = 0.79
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 376 VLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVE 474
           V E+D CKHQ+C  C           CP CR +
Sbjct: 87  VCEIDVCKHQICLTCIKEWAEKYKTQCPYCRAK 119


>UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 374

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 19/73 (26%), Positives = 29/73 (39%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 459
           M   KL   +CF   ++     +P D   ++PV  L  C H +C +C           CP
Sbjct: 1   MNLEKLSELLCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCP 56

Query: 460 LCRVESLHFNVYS 498
           +C       N+ S
Sbjct: 57  ICENPEAFGNIIS 69


>UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12.4;
           n=2; Caenorhabditis|Rep: Putative uncharacterized
           protein R02E12.4 - Caenorhabditis elegans
          Length = 639

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = +1

Query: 280 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 459
           +EF  +QC+ICF V    N+  +P+  L         TCKH +C+ C           CP
Sbjct: 19  LEFEDVQCHICFQV----NH--EPVTFL---------TCKHSICAGCAGRWLSSCSV-CP 62

Query: 460 LC--RVESLHFN 489
           +C  RV  +H N
Sbjct: 63  MCRTRVREIHLN 74


>UniRef50_Q3ZJ93 Cluster: DNA-directed RNA polymerase subunit beta;
            n=20; cellular organisms|Rep: DNA-directed RNA polymerase
            subunit beta - Pseudendoclonium akinetum (Green alga)
          Length = 2178

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
 Frame = +1

Query: 193  LLWAAASAHWQVLRLVLFS-AKGRRCSRLKMEFVKLQCNICFSVAEIKNYFMQPIDRLTI 369
            L W+A  A  Q LR +LFS  K ++ + LK   VK +  I ++  E K  + Q I++   
Sbjct: 1262 LFWSACFADKQSLRSILFSLKKSQKVTTLKKTKVKKKFEIVYN--ENKKKYFQKINKNFF 1319

Query: 370  IPVL 381
            +P+L
Sbjct: 1320 LPLL 1323


>UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4;
           Xenopus|Rep: E3 ubiquitin-protein ligase RNF138 -
           Xenopus laevis (African clawed frog)
          Length = 222

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 322 AEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCR 468
           +EI   F+ P+ +  +   +   TC+H  C  C           CPLCR
Sbjct: 9   SEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCR 57


>UniRef50_UPI00015B4C60 Cluster: PREDICTED: similar to ring finger
           protein 207; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to ring finger protein 207 - Nasonia vitripennis
          Length = 940

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 262 RCSRLKMEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC 420
           RC R      KL C IC  V ++K    QP   + +  ++E   C++  C+ C
Sbjct: 73  RCLRGPHLEGKLSCPICRQVTQLKEGMQQPPSDVLMRQLVEFANCENPPCANC 125


>UniRef50_A0DI49 Cluster: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_51,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 384

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 370 IPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVESLHF 486
           IP++ L  CKH  C  C           CP CR++  H+
Sbjct: 46  IPIV-LPDCKHTFCRDCLDAWVGQQAMNCPYCRIDVSHY 83


>UniRef50_Q2H492 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 496

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query: 389 TRANINYAQCAYARL-GNEKKYHVPCAGLKVCISTFTA*TERCGR 520
           T+A++ ++Q AYA L  + K Y +  A L    STF +  E C R
Sbjct: 51  TKADLAHSQAAYADLLASAKAYRLALASLSTAASTFGSALEACAR 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,527,956
Number of Sequences: 1657284
Number of extensions: 10116541
Number of successful extensions: 22776
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 22275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22766
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -