Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120953.seq
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   6.0  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         23   7.9  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 214 AHWQVLRLVLFSAKGR 261
           AHW++ RLVL    G+
Sbjct: 487 AHWKIQRLVLLQKPGK 502


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 281 IFRRLHLRPFAENNTRRRTCQCADAA 204
           IFRRL  +P+   +     C C D +
Sbjct: 42  IFRRLLTKPYLSGSGTLCVCVCVDVS 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,146
Number of Sequences: 2352
Number of extensions: 11582
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)