Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120952.seq
         (624 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP...   127   2e-28
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2...   113   3e-24
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ...    54   4e-06
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro...    48   1e-04
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat...    42   0.016
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -...    37   0.45 
UniRef50_Q64SI0 Cluster: Putative uncharacterized protein; n=2; ...    34   3.2  

>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
           IAP2-VLF1 intergenic region; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 133

 Score =  127 bits (306), Expect = 2e-28
 Identities = 69/118 (58%), Positives = 76/118 (64%)
 Frame = +1

Query: 271 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXXDWLCEQVYPDKXFSLKLKRVINMFLNDXIX 450
           MSNLMKNFFTE                   +WLCEQVYPDK FSLKLKRV+NMFLN+ I 
Sbjct: 1   MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNMFLNNEIE 60

Query: 451 NDXIXKLVXTVDSSNKLXRXRLIF*YXALXNNVSVXXTLHRFVDDKRFXHKTSSSFLA 624
           N+ I KLV TVDSSNKL R ++ F   AL NNVSV  TLHRFVDD     +   SFLA
Sbjct: 61  NNKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDD-NVLTQDELSFLA 117


>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
           IAP2-VLF1 intergenic region; n=12;
           Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 84

 Score =  113 bits (272), Expect = 3e-24
 Identities = 62/80 (77%), Positives = 62/80 (77%)
 Frame = +2

Query: 11  LLGALTIFSLVYDKKENSXXXXXXXXXXXXXXXXSPAIISKNTESNVEDIPSHKAKSVRK 190
           LLGAL IFSLVYDKKENS                SPAIISKNTES VEDIPSHKAKSVRK
Sbjct: 6   LLGALAIFSLVYDKKENSIFLYLLILFLVFIIV-SPAIISKNTESTVEDIPSHKAKSVRK 64

Query: 191 KLEIEQALDAILNKNTSSID 250
           KLEIEQALDAILNKNTSSID
Sbjct: 65  KLEIEQALDAILNKNTSSID 84


>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 130

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 27/77 (35%), Positives = 41/77 (53%)
 Frame = +1

Query: 361 DWLCEQVYPDKXFSLKLKRVINMFLNDXIXNDXIXKLVXTVDSSNKLXRXRLIF*YXALX 540
           DWL  QVYPD+ FS K + V+ MF++  +  + +  LV T+D S  L   ++ +   A  
Sbjct: 31  DWLNSQVYPDERFSAKWRGVLKMFVDGQLDEESVYCLVNTIDPSKLLTVGQINYLARAFR 90

Query: 541 NNVSVXXTLHRFVDDKR 591
           NN  +     +FVD  R
Sbjct: 91  NNRKMMSITQKFVDGYR 107


>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
           Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
           dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
          Length = 86

 Score = 48.4 bits (110), Expect = 1e-04
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = +2

Query: 131 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 250
           K   S+  D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47  KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86


>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
           bilineata nucleopolyhedrosis virus
          Length = 130

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 388 DKXFSLKLKRVINMFLNDXIXNDXIXKLVXTVDSSNKLXRXRLIF*YXALXNNVSVXXTL 567
           DK F  K  +V+ MF+   I  + +  ++  VDS NKL   ++ F    + +N  V   L
Sbjct: 38  DKRFCDKFVKVLKMFIASQITIEDMCNIMAAVDSPNKLTADQIDFLCQQVQHNHEVMRIL 97

Query: 568 HRFVDDK 588
           H FVD++
Sbjct: 98  HTFVDEQ 104


>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
           Xestia c-nigrum granulosis virus (XnGV) (Xestia
           c-nigrumgranulovirus)
          Length = 85

 Score = 36.7 bits (81), Expect = 0.45
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 134 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 250
           NT+S   D+ + + K  +KK       DAILNKN SS++
Sbjct: 47  NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85


>UniRef50_Q64SI0 Cluster: Putative uncharacterized protein; n=2;
           Bacteroides|Rep: Putative uncharacterized protein -
           Bacteroides fragilis
          Length = 241

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -1

Query: 342 HGHLSGERCRFDQFGEKVFH*IGHFNEHLYQSIELVFLFKIASSACSISNFFRTLLAL*L 163
           HG++           EK    I +  EHLY+S+  + L+   ++ACS S+    LL +  
Sbjct: 126 HGNIEPSDALILTINEKAIRDIANEGEHLYKSVSDLVLYATGAAACSTSD----LLMVLE 181

Query: 162 GMSSTLDSV 136
            ++ +LDS+
Sbjct: 182 SVNKSLDSI 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,590,557
Number of Sequences: 1657284
Number of extensions: 7137512
Number of successful extensions: 16190
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16185
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)