Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120951.seq
         (641 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q02785 Cluster: ATP-dependent permease PDR12; n=5; Sacc...    33   7.7  

>UniRef50_Q02785 Cluster: ATP-dependent permease PDR12; n=5;
            Saccharomycetales|Rep: ATP-dependent permease PDR12 -
            Saccharomyces cerevisiae (Baker's yeast)
          Length = 1511

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 599  STICSFLHIFTK*CRCFTSAQASRDGSFFFLVAIFFPQLYITY 471
            ST+C F+           S +AS  G FFF   + FP  ++TY
Sbjct: 1266 STLCQFMCFICYYWPAQFSGRASHAGFFFFFYVLIFPLYFVTY 1308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 591,250,875
Number of Sequences: 1657284
Number of extensions: 11341453
Number of successful extensions: 22640
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 22092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22639
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)