Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120951.seq
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0059 - 444991-446908,447595-448218,448431-448861,450974-45...    27   9.6  
06_01_0602 - 4342333-4342790,4342899-4345623                           27   9.6  
05_03_0497 - 14715267-14715548,14715648-14715830,14715911-147166...    27   9.6  
03_05_0522 - 25161595-25162285,25162394-25163139                       27   9.6  

>11_01_0059 -
           444991-446908,447595-448218,448431-448861,450974-452293
          Length = 1430

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 14/57 (24%), Positives = 25/57 (43%)
 Frame = +2

Query: 194 WDFCWRLHNTSKAAVGELF*YYPKIFLCKLILPHDEEQKKKNVIASF*HLSYYSPHD 364
           W FCW      +     L+    + F  KL +  D E +K+  + +  H+ ++ P D
Sbjct: 302 WLFCWPCALAQEVRTESLYHIDCETFYKKLPVVDDVEDEKRLPLLASHHVQFHEPPD 358


>06_01_0602 - 4342333-4342790,4342899-4345623
          Length = 1060

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = -2

Query: 637 FILIHYDHILVPYPQSVLFCIFLQNNVDVSH 545
           ++++H++H+    P  +  C+ LQ N+D+SH
Sbjct: 447 WLVLHHNHLAGVIPPGIAQCVNLQ-NLDLSH 476


>05_03_0497 -
           14715267-14715548,14715648-14715830,14715911-14716668,
           14716762-14717167,14717274-14717399,14717506-14717625,
           14717675-14718463,14718554-14718709,14718800-14718898,
           14718989-14719108,14719165-14719251
          Length = 1041

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 256 ILKKFPDRCFRSIVETPTEIPQRSRDK--SPWR 164
           I+ KF DR  RS+     ++P+ S+D   +PW+
Sbjct: 517 IIDKFADRGLRSLAVARQKVPEGSKDAPGTPWQ 549


>03_05_0522 - 25161595-25162285,25162394-25163139
          Length = 478

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 625 HYDHILVPYPQSVLFCIFLQNNV-DVSHLPRRPVTAHFFS 509
           HY+  ++P+  S  +CI + + V   S  P  P+  H FS
Sbjct: 159 HYEVFMIPFVNSEQYCIEIADLVLKESEWPPSPLILHVFS 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,336,002
Number of Sequences: 37544
Number of extensions: 291558
Number of successful extensions: 602
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)