Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120951.seq
         (641 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g59130.1 68416.m06592 DC1 domain-containing protein contains ...    30   1.5  
At5g22130.1 68418.m02576 mannosyltransferase family protein simi...    28   6.1  
At5g23580.1 68418.m02767 calcium-dependent protein kinase 9 (CDP...    27   8.0  
At4g09360.1 68417.m01545 disease resistance protein (NBS-LRR cla...    27   8.0  

>At3g59130.1 68416.m06592 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 329

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 155 KDLSPWTLISGSLWDFCWRLHNTSK 229
           +D++P+  ISGSL + CW  H+  K
Sbjct: 162 EDIAPYKKISGSLIEHCWHQHHFLK 186


>At5g22130.1 68418.m02576 mannosyltransferase family protein similar
           to mannosyltransferase from Rattus norvegicus
           [GI:11414877], Homo sapiens [GI:11414879]; contains Pfam
           profile PF05007: Mannosyltransferase (PIG-M)
          Length = 450

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 601 YPQSVLFCIFLQNNVDVSHLPRRPVTAHFFSWW 503
           + Q ++FCIFLQ    V+    + +TA +F W+
Sbjct: 325 FSQDLVFCIFLQTVAFVTF--NKVITAQYFVWF 355


>At5g23580.1 68418.m02767 calcium-dependent protein kinase 9 (CDPK9)
           identical to calcium-dependent protein kinase
           [Arabidopsis thaliana] gi|836938|gb|AAA67653; contains
           protein kinase domain, Pfam:PF00069; contains EF hand
           domain (calcium-binding EF-hand), Pfam:PF00036,
           INTERPRO:IPR002048
          Length = 490

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 535 AWADVKHRHYFVKICRKEQIVDRELKYGH 621
           A+ D K+ H  +++C   ++ DR +K GH
Sbjct: 89  AYEDTKNVHLVMELCEGGELFDRIVKRGH 117


>At4g09360.1 68417.m01545 disease resistance protein (NBS-LRR
           class), putative domain signature NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 853

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -3

Query: 606 FPIHNLFFSAYFYKIMSMFHICPGVP*RLIFFLG 505
           FPI + F+      IM   HI  G P R I F G
Sbjct: 466 FPIISSFYDLKSLSIMRFSHIADGTPFRCISFSG 499


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,985,360
Number of Sequences: 28952
Number of extensions: 255877
Number of successful extensions: 521
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)