Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120950.seq
         (625 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9U4Y5 Cluster: Hitcher protein; n=1; Manduca sexta|Rep...    86   6e-16
UniRef50_A4J318 Cluster: Peptidase M23B precursor; n=2; cellular...    33   7.3  

>UniRef50_Q9U4Y5 Cluster: Hitcher protein; n=1; Manduca sexta|Rep:
           Hitcher protein - Manduca sexta (Tobacco hawkmoth)
           (Tobacco hornworm)
          Length = 291

 Score = 86.2 bits (204), Expect = 6e-16
 Identities = 42/66 (63%), Positives = 46/66 (69%)
 Frame = +1

Query: 31  SSLKPETPRLLEYIDSNSDSSDTATCDLDSRTLPLTPLNFILSDDDHTVCDSSDLQYDSF 210
           S+    T RL EYIDSNSDSSDT         + LT LN I  D+DHT+CDSSDLQYDSF
Sbjct: 226 STAGTSTSRLYEYIDSNSDSSDTTVTHDADNIVHLTSLNMISPDEDHTLCDSSDLQYDSF 285

Query: 211 VDMGKF 228
           VDMGKF
Sbjct: 286 VDMGKF 291


>UniRef50_A4J318 Cluster: Peptidase M23B precursor; n=2; cellular
           organisms|Rep: Peptidase M23B precursor -
           Desulfotomaculum reducens MI-1
          Length = 598

 Score = 32.7 bits (71), Expect = 7.3
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 227 NFPISTKESYCKSELSHTVWSSSDKMKLRGV 135
           N P S+ + +C++E +  +W  ++K  LRGV
Sbjct: 430 NKPYSSTQEWCRAEYASIIWGFAEKFNLRGV 460


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,306,744
Number of Sequences: 1657284
Number of extensions: 10327435
Number of successful extensions: 24156
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24127
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)