Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120950.seq
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.68 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.4  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +1

Query: 82  SDSSDTATCDLD---SRTLPLTPLNFILSD 162
           SD SD  TCD+D   +R  P  P   +L D
Sbjct: 143 SDGSDENTCDIDNDPNRAPPCDPAVCVLPD 172


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = +2

Query: 215 IWGSFNSHISIIFDRQYVIMLLCV*LLFHVTVLLDVF 325
           +W  F+    ++FD  Y I+      + +  V  D F
Sbjct: 152 VWFPFDYKQPVVFDLVYFILAFACISIAYTNVSTDAF 188


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 231 LKLPHIYKRVVLQIGTV 181
           + +P+I  +++L IGTV
Sbjct: 645 ISMPYIGYQIILMIGTV 661


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,642
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)