Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120950.seq
         (625 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070931-1|AAL48553.1|  611|Drosophila melanogaster RE03173p pro...    29   5.1  
AL021726-3|CAA16810.1|  611|Drosophila melanogaster EG:171E4.2 p...    29   5.1  
AJ626646-1|CAF25166.1|  611|Drosophila melanogaster singed wings...    29   5.1  
AE014298-242|AAF45654.3|  611|Drosophila melanogaster CG3095-PA ...    29   5.1  

>AY070931-1|AAL48553.1|  611|Drosophila melanogaster RE03173p
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 236 ES*NFPISTKESYCKSELSHTVWSSSDKMKLRGVSGSVR 120
           ES NF ++ K SYC+   +HT + S+DK+ +  +    R
Sbjct: 328 ESINF-LNPKHSYCQYNATHTWFQSTDKVSVEQLENRKR 365


>AL021726-3|CAA16810.1|  611|Drosophila melanogaster EG:171E4.2
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 236 ES*NFPISTKESYCKSELSHTVWSSSDKMKLRGVSGSVR 120
           ES NF ++ K SYC+   +HT + S+DK+ +  +    R
Sbjct: 328 ESINF-LNPKHSYCQYNATHTWFQSTDKVSVEQLENRKR 365


>AJ626646-1|CAF25166.1|  611|Drosophila melanogaster singed wings
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 236 ES*NFPISTKESYCKSELSHTVWSSSDKMKLRGVSGSVR 120
           ES NF ++ K SYC+   +HT + S+DK+ +  +    R
Sbjct: 328 ESINF-LNPKHSYCQYNATHTWFQSTDKVSVEQLENRKR 365


>AE014298-242|AAF45654.3|  611|Drosophila melanogaster CG3095-PA
           protein.
          Length = 611

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -3

Query: 236 ES*NFPISTKESYCKSELSHTVWSSSDKMKLRGVSGSVR 120
           ES NF ++ K SYC+   +HT + S+DK+ +  +    R
Sbjct: 328 ESINF-LNPKHSYCQYNATHTWFQSTDKVSVEQLENRKR 365


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,165,414
Number of Sequences: 53049
Number of extensions: 494534
Number of successful extensions: 1396
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)