Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120949.seq
         (637 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0LY26 Cluster: Protein containing DUF323; n=10; Bacter...    33   7.6  

>UniRef50_A0LY26 Cluster: Protein containing DUF323; n=10;
           Bacteroidetes|Rep: Protein containing DUF323 - Gramella
           forsetii (strain KT0803)
          Length = 387

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = +3

Query: 438 RWYATPVTMSLPSFVVNLYLFGKYIYSN*RT--LNSYLNPVGVKMTWVNRNSLGCMXKAW 611
           +W+    T     FV+  Y+    +Y        NSY   VG K+   NR +L     AW
Sbjct: 42  KWHLGHTTWFFEEFVLKKYVDTHKLYDENTAYVFNSYYESVGEKVIRTNRGNLSRPTVAW 101

Query: 612 VLKIEWYL 635
           + K   Y+
Sbjct: 102 IYKFRKYV 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,774,617
Number of Sequences: 1657284
Number of extensions: 7174188
Number of successful extensions: 13537
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13532
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)