Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120947.seq
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = -2

Query: 512 RRETGTCEVEGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPAC 366
           R  T TC  EG    T  WL+  H   D+  +  R  S  +  +G   C
Sbjct: 343 RPATFTCNFEGNPIKTISWLKDGH-PIDHNEAVLRIESVRKEDKGMYQC 390


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 3   VIPHPRVPQLPPRHIHL 53
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 3   VIPHPRVPQLPPRHIHL 53
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 3   VIPHPRVPQLPPRHIHL 53
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 234 YKGIVDASSVSPRSRVSFHSGVV 302
           YKG++D      +  + FH G V
Sbjct: 551 YKGLIDRIKSREKLTMKFHDGEV 573


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   IPHPRVPQLPP 38
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 6   IPHPRVPQLPP 38
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 395 CQHRRGTPACTCP 357
           CQ + G  AC CP
Sbjct: 432 CQDKLGDYACYCP 444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,743
Number of Sequences: 336
Number of extensions: 2705
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)