Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120947.seq
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 80 3e-16
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 1e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 39 5e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.019
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 32 0.079
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 31 0.14
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.18
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.18
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.24
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.55
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 0.55
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 28 0.97
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.3
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 27 2.2
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 27 2.2
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 27 3.0
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 27 3.0
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 26 3.9
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 26 5.2
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 25 6.8
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 25 6.8
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 6.8
SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr 3|... 25 9.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 79.8 bits (188), Expect = 3e-16
Identities = 40/92 (43%), Positives = 54/92 (58%)
Frame = +2
Query: 209 QADRRRPALQGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 388
+A R +G C R E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GY 121
Query: 389 VDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPL 484
++ + ++F SL FVY L
Sbjct: 122 KKERDGYAKWFAGNLASGGAAGAASLLFVYSL 153
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +3
Query: 105 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGI 245
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGI 74
Score = 33.1 bits (72), Expect = 0.034
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 571 KIFKSDGLIGLYRGFGVSV 627
K ++SDGL GLYRGFG SV
Sbjct: 184 KTYRSDGLRGLYRGFGPSV 202
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +3
Query: 120 LAGGISAAVSKTAVAPIERVKLLLQVQH 203
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 254 LVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 373
LV+I +GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 63 LVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 111 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRY 236
K +AGG + V+K+ VAP++RVK+L Q H S + A R+
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH 60
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.019
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3
Query: 93 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 191
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 2.2
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +3
Query: 117 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 212
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 31.9 bits (69), Expect = 0.079
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 523 REMASVNSPVFG--NCISKIFKSDGLIGLYRGFG 618
+ AS+ P G + + ++KS+GL+GL+RGFG
Sbjct: 272 KSAASLVKPKIGIRHVLGGLYKSEGLLGLFRGFG 305
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 31.1 bits (67), Expect = 0.14
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 203 RQQADRRRPALQGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 379
R Q + G CL +I K +G +RG ++ P +AL FA D Y +++
Sbjct: 35 RMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.18
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 96 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 200
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
Frame = +1
Query: 544 SPVFGN---CISKIFKSDGLIGLYRG 612
SP++ N C+ KI K++GL Y+G
Sbjct: 52 SPIYNNALDCVKKISKNEGLAAFYKG 77
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 102 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQ 200
+F KDFLA G+S V++ V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 120 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVD 251
++GG+S A++ + P++ VK LLQ + S I ++ KG +D
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLD 251
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.24
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 54 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 194
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.55
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 120 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 209
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 29.1 bits (62), Expect = 0.55
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 117 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDASSVSPR 272
FL+GG++A + T P E +K Q+Q ++K + + YK + A S+ R
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIAR 79
Score = 28.7 bits (61), Expect = 0.73
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 559 NCISKIFKSDGLIGLYRGFG 618
+CI K +S+G LY+GFG
Sbjct: 271 DCILKTIRSEGFFALYKGFG 290
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 0.97
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 541 NSPVFGNCISKIFKSDGLIGLYRG 612
N P +C K++GL GLYRG
Sbjct: 49 NFPTIRSCFQNAVKNEGLKGLYRG 72
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 111 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 200
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 275 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 400
+G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 65 EGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 565 ISKIFKSDGLIGLYRGFGVS 624
I I+K +G+ G +RGFGV+
Sbjct: 148 IRDIWKKEGISGFFRGFGVT 167
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 559 NCISKIFKSDGLIGLYRGFGVSV 627
N IS + +S+GL G YRG+ + V
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGV 143
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 451 RSHLSVLRVPPSTSHVPV--SRRCSVREMASVNSP 549
R+H+S+L VP T+ VPV SR ++ NSP
Sbjct: 245 RAHMSLLGVPDITTTVPVSLSRYDNLSSWGMYNSP 279
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 224 RPALQGYRRCLVRIPKEQGLLSFWRGNFANV 316
R + GY+R L+ +P +G++ R +F N+
Sbjct: 1566 RTRITGYKRRLLGVPVSKGVIDTSRAHFTNM 1596
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 26.2 bits (55), Expect = 3.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 541 NSPVFGNCISKIFKSDGLIGLYRG 612
+SP I I+K++G+ GLYRG
Sbjct: 242 SSPGIMQTIMSIYKNNGIKGLYRG 265
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +1
Query: 487 TSHVPVSRRCSVREMASVNSPVFGNCISKI 576
+S + SR+ S + S N+PVFG + +
Sbjct: 150 SSSLNYSRKLSSNSIKSTNAPVFGTAVKNV 179
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 251 CLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
C +I + GLL FW G + R + + F +K ++
Sbjct: 246 CAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 550 PENSRWPSPLPNIGARRVRAKSKGVHEAQ 464
P N R P P N R+ R S G+ + Q
Sbjct: 208 PSNPRQPPPTSNFSNRKARYASNGLVQLQ 236
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 229 WSAAICLLTCCTWSSSLTRSMGATAV 152
WSA I +LT C SLT S+ T +
Sbjct: 543 WSADIIMLTYCQDGISLTHSLKLTDI 568
>SPCC18.08 |||lysine-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 531
Score = 25.0 bits (52), Expect = 9.0
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 299 HARMKGDPAPWGYGRGIDDTLVTLVGGDLLADVL 198
HA G P G+G G+D ++ + G ++++L
Sbjct: 490 HALEYGLPPTAGWGMGVDRLVMLMTGQSKISEIL 523
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,401,960
Number of Sequences: 5004
Number of extensions: 43923
Number of successful extensions: 200
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -