Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120947.seq
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 49 4e-06
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.027
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 36 0.027
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 36 0.036
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.063
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.25
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.33
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.44
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.58
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.58
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.8
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.4
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 29 3.1
SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05) 29 3.1
SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17) 29 4.1
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.4
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.4
SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 28 7.2
SB_50323| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-34) 27 9.5
SB_50303| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-25) 27 9.5
SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18) 27 9.5
SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 27 9.5
SB_11519| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 9.5
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2
Query: 209 QADRRRPALQGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 379
+A R +G C R + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 45 KAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF 101
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 105 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDASSVSPRSR- 278
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D +S + RS
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 279 -VSFHSG 296
+SF G
Sbjct: 69 FLSFWRG 75
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 571 KIFKSDGLIGLYRGFGVS 624
K SDGL+GLYRGF +S
Sbjct: 165 KTIASDGLVGLYRGFVIS 182
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +2
Query: 209 QADRRRPALQGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 373
Q + P +G L++I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 63 QIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +3
Query: 111 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 200
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ 65
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 78 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 254
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 255 S 257
+
Sbjct: 61 T 61
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3
Query: 126 GGISAAVSKTAVAPIERVKLLLQVQ 200
GG A VS+TA AP++R+K+LLQVQ
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ 167
Score = 35.5 bits (78), Expect = 0.036
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 269 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 400
+E G+ S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 185 REGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTK 226
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 230 ALQGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 352
A G R + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 93 AKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 99 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQV 197
+ + + FL GG SA ++++ +P+E VK+L QV
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV 88
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 120 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 245
LAG S ++ V P E +K L VQHV+K ++ YKG+
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGM 195
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 35.9 bits (79), Expect = 0.027
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +2
Query: 254 LVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 373
L +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 598 LAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 35.5 bits (78), Expect = 0.036
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 194 STARQQADRRRPALQ--GYRR---CLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFK 358
S R +D R P Q GY L R+ KE+G+L+ WRG +R A A
Sbjct: 17 SLIRMTSDGRLPPEQRRGYTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATY 76
Query: 359 DKYKQVFL 382
+ KQ+ L
Sbjct: 77 SQAKQLLL 84
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 254 LVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 412
L++IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 67 LIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 254 LVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
L +P+E L W G F++VI F A+N AF+++YK++
Sbjct: 269 LFSLPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 263 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 20 IYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 263 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 93 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 224
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMAS 53
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 236 QGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 403
+G C + KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 33 RGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 129 GISAAVSKTAVAPIERVKLLLQVQH 203
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 139 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 5
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 139 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 5
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 75 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 245
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 246 VD 251
D
Sbjct: 79 KD 80
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 123 AGGISAAVSKTAVAPIERVKLLLQ 194
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 239 GYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQA 340
GY C+ +I G+ +F +G A ++R FPT A
Sbjct: 402 GYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 559 NCISKIFKSDGLIGLYRGFGVS 624
+C+ K+F S+GL G +RG ++
Sbjct: 302 DCLKKVFHSEGLRGCFRGMAIT 323
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +3
Query: 162 APIERVKLLLQVQHVSKQIAADQRYKGIVD 251
AP ERVK LLQVQ K+ RY+G+ D
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGD 205
>SB_41780| Best HMM Match : Mito_carr (HMM E-Value=3.9e-05)
Length = 383
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 559 NCISKIFKSDGLIGLYRGFG 618
+C I++ +G+ G YRGFG
Sbjct: 332 DCFRTIYQQEGIFGFYRGFG 351
>SB_30900| Best HMM Match : Extensin_2 (HMM E-Value=0.17)
Length = 473
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = -2
Query: 557 PKTGEFTLAISLTEHRRETGTCEVEGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRG 378
P G T A + HRR + GT + + R HHRR TA++ H R
Sbjct: 390 PTPGTIT-ADTRHHHRRHPAPSPLTPGTITADT--RHHHRRHPAPTPGTITANTRHHHRR 446
Query: 377 TPACTCP 357
PA + P
Sbjct: 447 HPAPSPP 453
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 266 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 382
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 263 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 379
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 263 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 921
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 342 SAWVGKYLMTLAKLPRQNERRPCSLGIRTRHRRYPCNAG 226
+AW K LA+ P R PC L T R YP G
Sbjct: 575 AAWGPKRSGCLAREPSTAPRLPCDLVAATSARMYPAGQG 613
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 499 PVSRRCSVREMASVNSPVFGNCISKIFKSD 588
P RRCS E+ S++ +FGN I K + D
Sbjct: 352 PRLRRCSSLEIFSLSREIFGNDIRKTAEKD 381
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 203 RQQADRRRPALQGYRR---CLVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 349
+ Q + +R YR CLV++ + +GL ++GN +R P A+ F
Sbjct: 62 QMQTEAKRSTRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFAVYF 113
>SB_50323| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-34)
Length = 411
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 248 RCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
R L +P+E L F+ ++VI F +N F+++YK++
Sbjct: 264 RGLFSLPRELYFLYFFLATLSSVINPFIYGVMNPMFREEYKKI 306
>SB_50303| Best HMM Match : zf-C2H2 (HMM E-Value=1.6e-25)
Length = 319
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = -1
Query: 624 GHTETSVQTDQTVGLEDLADAVSEDRRIHAGHLPYRTSARDGYVRSRRGYTKH 466
G + Q D + A + RIH G PYR +V RR +T+H
Sbjct: 9 GERPYTCQVDDCMKSFTTAGNLKNHMRIHTGERPYRCP----FVNCRRSFTEH 57
>SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18)
Length = 1085
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +1
Query: 220 PPTSVT---RVSSMPRPYPQGAGSP 285
PP S RV PRP+P GAG P
Sbjct: 1014 PPVSYPSGHRVPPPPRPFPMGAGQP 1038
>SB_22476| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 269
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 549 RRIHAGHLPYRTSARDGYVRSRRGYTKHRE 460
R HAG+ + Y RS R YTKH E
Sbjct: 179 RTKHAGYTQTMRTKHAEYTRSMRTYTKHAE 208
>SB_11519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 242 YRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 376
+ R ++ +P+E +L W G + VI +N F+++YK++
Sbjct: 264 FARGILFLPRELYILYSWLGLLSTVINPLIYGVMNPMFREEYKKI 308
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 425 QRSNARTASSCQHRRGTPACTCP 357
Q + R S CQ RRG C CP
Sbjct: 934 QLVSCRFYSKCQRRRGGAQCVCP 956
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530,672
Number of Sequences: 59808
Number of extensions: 391236
Number of successful extensions: 1507
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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