Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120947.seq
(630 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 132 2e-33
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 132 2e-33
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 30 0.021
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 7.5
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 9.9
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 132 bits (320), Expect = 2e-33
Identities = 64/94 (68%), Positives = 66/94 (70%)
Frame = +2
Query: 236 QGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWR 415
+G C VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF R
Sbjct: 54 KGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLR 113
Query: 416 YFXXXXXXXXXXXXTSLCFVYPLRLRTYPSRADV 517
YF TSLCFVYPL ADV
Sbjct: 114 YFVGNLASGGAAGATSLCFVYPLDFARTRLAADV 147
Score = 103 bits (248), Expect = 1e-24
Identities = 48/67 (71%), Positives = 58/67 (86%)
Frame = +3
Query: 78 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAS 257
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 258 SVSPRSR 278
P+ +
Sbjct: 61 VRIPKEQ 67
Score = 50.4 bits (115), Expect = 1e-08
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +1
Query: 556 GNCISKIFKSDGLIGLYRGFGVSVQ 630
GNC++KIFK+DG+ GLYRGFGVSVQ
Sbjct: 160 GNCLTKIFKADGITGLYRGFGVSVQ 184
Score = 38.7 bits (86), Expect = 5e-05
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 480 PFDFARTRLAPMFGKGDGQREFSGL 554
P DFARTRLA GK G+REF+GL
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGL 159
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 239 GYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 361
G CL +I K G+ +RG +V +A F F D
Sbjct: 158 GLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 132 bits (320), Expect = 2e-33
Identities = 64/94 (68%), Positives = 66/94 (70%)
Frame = +2
Query: 236 QGYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWR 415
+G C VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQF R
Sbjct: 54 KGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLR 113
Query: 416 YFXXXXXXXXXXXXTSLCFVYPLRLRTYPSRADV 517
YF TSLCFVYPL ADV
Sbjct: 114 YFVGNLASGGAAGATSLCFVYPLDFARTRLAADV 147
Score = 103 bits (248), Expect = 1e-24
Identities = 48/67 (71%), Positives = 58/67 (86%)
Frame = +3
Query: 78 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAS 257
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 258 SVSPRSR 278
P+ +
Sbjct: 61 VRIPKEQ 67
Score = 50.4 bits (115), Expect = 1e-08
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +1
Query: 556 GNCISKIFKSDGLIGLYRGFGVSVQ 630
GNC++KIFK+DG+ GLYRGFGVSVQ
Sbjct: 160 GNCLTKIFKADGITGLYRGFGVSVQ 184
Score = 38.7 bits (86), Expect = 5e-05
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 480 PFDFARTRLAPMFGKGDGQREFSGL 554
P DFARTRLA GK G+REF+GL
Sbjct: 135 PLDFARTRLAADVGKAGGEREFTGL 159
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 239 GYRRCLVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 361
G CL +I K G+ +RG +V +A F F D
Sbjct: 158 GLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 29.9 bits (64), Expect = 0.021
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 497 TCEVEGGTRSTERWLRRHHRRPDYQRSNARTASSC 393
TC+V G T ST+ L+RH + +Q N+ + C
Sbjct: 373 TCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALC 407
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 524 LTEHRRETGT--CEVEGGTRSTERWLR 450
+T + +T T CEV G T T WL+
Sbjct: 817 VTVKKGDTATLHCEVHGDTPVTVTWLK 843
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 524 LTEHRRETGT--CEVEGGTRSTERWLR 450
+T + +T T CEV G T T WL+
Sbjct: 813 VTVKKGDTATLHCEVHGDTPVTVTWLK 839
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -2
Query: 512 RRETGTCEVEGGTRSTERWLR 450
R T TC V G T WL+
Sbjct: 323 RPATFTCNVRGNPIKTVSWLK 343
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 276 CSLGIRTRHRRYPCNAGRRRS 214
C LGI ++R P GR++S
Sbjct: 111 CLLGIVDDYQRNPSVVGRKKS 131
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +3
Query: 3 VIPHPRVPQLPPRHIHLVKIT 65
+I P +LPP H H +T
Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,352
Number of Sequences: 438
Number of extensions: 3334
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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