Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120945.seq
         (617 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K1J4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.5  
UniRef50_Q6KIA4 Cluster: Expressed protein; n=1; Mycoplasma mobi...    33   7.2  
UniRef50_Q9VIS7 Cluster: CG10462-PA, isoform A; n=4; Drosophila ...    33   7.2  
UniRef50_UPI00006CDA2B Cluster: ATPase, histidine kinase-, DNA g...    32   9.5  
UniRef50_Q88TP0 Cluster: ABC transporter, ATP-binding and permea...    32   9.5  

>UniRef50_A5K1J4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1860

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +3

Query: 111 FSQFLFNLTFVRKFTFFGIHEVMNVYFDRTINTFIDLYEPVISRVFVSAVDT 266
           + ++  N    +KFTFF IHE++  YF+     +++L+    S  F    +T
Sbjct: 155 YKEYSVNEKRKKKFTFFEIHEILISYFNALTFVYLNLFNCYYSHNFCKQQNT 206


>UniRef50_Q6KIA4 Cluster: Expressed protein; n=1; Mycoplasma
           mobile|Rep: Expressed protein - Mycoplasma mobile
          Length = 309

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 99  ESGVFSQFLFNLTFVRKFTFFGIHEVMNVYFDRTINTFI 215
           E+  F Q  FN   ++KF  FGI+++    F  T N F+
Sbjct: 132 ENNQFEQIFFNEVALKKFNKFGIYKINEEMFSETRNEFL 170


>UniRef50_Q9VIS7 Cluster: CG10462-PA, isoform A; n=4; Drosophila
           melanogaster|Rep: CG10462-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 812

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -2

Query: 139 NVKLNRNCENTPDSTRARSPQSFGSTWTISQTGL 38
           NVKL    E  PD +R +  QS GS WT   T L
Sbjct: 243 NVKLEPQDEEMPDVSRIKEEQSNGSVWTAIHTPL 276


>UniRef50_UPI00006CDA2B Cluster: ATPase, histidine kinase-, DNA
           gyrase B-, and HSP90-like domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: ATPase,
           histidine kinase-, DNA gyrase B-, and HSP90-like domain
           containing protein - Tetrahymena thermophila SB210
          Length = 1564

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +2

Query: 368 LSHSIQIYANFYAIENVKKLALSPFIELYYHFKFLTITRVIRV*LEL*FV*FVRRDRK*Y 547
           L  SI  Y N+Y    +  ++ +  + +Y+  KF +IT++I     L F   +RR++K Y
Sbjct: 127 LMSSIMFYNNWYISAAIIYIS-NISVYIYFFNKFFSITQIIAFLYPLLFYFILRREKKFY 185

Query: 548 FSTW*E 565
            +T+ E
Sbjct: 186 ATTYIE 191


>UniRef50_Q88TP0 Cluster: ABC transporter, ATP-binding and permease
           protein; n=11; Lactobacillales|Rep: ABC transporter,
           ATP-binding and permease protein - Lactobacillus
           plantarum
          Length = 595

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 126 FNLTFVRKFTFFGIHEVMNVYFDRTINTFIDLY 224
           F   F+    F G+  V+N+Y  R + TFID Y
Sbjct: 31  FKWFFIAAIVFSGLISVVNIYLPRVLQTFIDHY 63


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,508,671
Number of Sequences: 1657284
Number of extensions: 10295730
Number of successful extensions: 25009
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25006
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)