Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120944.seq
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 253 HVLFLCIHIFISRYVLWVNLLN 188
           H+LF C  IF + ++L++  L+
Sbjct: 179 HLLFCCAFIFFNMHLLFLLCLD 200


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 250 VLFLCIHIFISRYVLWVNLLNISF 179
           V+F+   +  S  ++W++L+ ISF
Sbjct: 258 VIFVICVLVQSEKIVWLHLVYISF 281


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 443 LSSPEG*RRRACSPLNRGDSGP 378
           ++SP G  R + SPL    S P
Sbjct: 166 MTSPSGFNRASVSPLISSSSSP 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,356
Number of Sequences: 336
Number of extensions: 2854
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)