Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120944.seq
         (616 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U65579-1|AAB51776.1|  210|Homo sapiens mitochondrial NADH dehydr...   132   9e-31
BC119754-1|AAI19755.1|  210|Homo sapiens NADH dehydrogenase (ubi...   132   9e-31
AF038406-1|AAC34273.1|  210|Homo sapiens NADH dehydrogenase-ubiq...   132   9e-31
AK223114-1|BAD96834.1|  210|Homo sapiens NADH dehydrogenase (ubi...   131   2e-30
BC119753-1|AAI19754.1|   64|Homo sapiens NDUFS8 protein protein.       47   5e-05

>U65579-1|AAB51776.1|  210|Homo sapiens mitochondrial NADH
           dehydrogenase-ubiquinone Fe-S protein 8, 23 kDa subunit
           prec protein.
          Length = 210

 Score =  132 bits (319), Expect = 9e-31
 Identities = 55/70 (78%), Positives = 66/70 (94%)
 Frame = +1

Query: 259 RAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGE 438
           ++++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRFRGEHALRRYPSGE
Sbjct: 49  KSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGE 108

Query: 439 ERCIACKLCE 468
           ERCIACKLCE
Sbjct: 109 ERCIACKLCE 118



 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/46 (78%), Positives = 36/46 (78%)
 Frame = +3

Query: 471 ICXAQXITIEAEDVRTVRGRTTRYDIDMTKCIYCGLCQEACPVDAI 608
           IC AQ ITIEAE       RTTRYDIDMTKCIYCG CQEACPVDAI
Sbjct: 120 ICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165


>BC119754-1|AAI19755.1|  210|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
           reductas protein.
          Length = 210

 Score =  132 bits (319), Expect = 9e-31
 Identities = 55/70 (78%), Positives = 66/70 (94%)
 Frame = +1

Query: 259 RAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGE 438
           ++++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRFRGEHALRRYPSGE
Sbjct: 49  KSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGE 108

Query: 439 ERCIACKLCE 468
           ERCIACKLCE
Sbjct: 109 ERCIACKLCE 118



 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/46 (78%), Positives = 36/46 (78%)
 Frame = +3

Query: 471 ICXAQXITIEAEDVRTVRGRTTRYDIDMTKCIYCGLCQEACPVDAI 608
           IC AQ ITIEAE       RTTRYDIDMTKCIYCG CQEACPVDAI
Sbjct: 120 ICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165


>AF038406-1|AAC34273.1|  210|Homo sapiens NADH
           dehydrogenase-ubiquinone Fe-S protein 8 23 kDa subunit
           protein.
          Length = 210

 Score =  132 bits (319), Expect = 9e-31
 Identities = 55/70 (78%), Positives = 66/70 (94%)
 Frame = +1

Query: 259 RAMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGE 438
           ++++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRFRGEHALRRYPSGE
Sbjct: 49  KSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGE 108

Query: 439 ERCIACKLCE 468
           ERCIACKLCE
Sbjct: 109 ERCIACKLCE 118



 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/46 (78%), Positives = 36/46 (78%)
 Frame = +3

Query: 471 ICXAQXITIEAEDVRTVRGRTTRYDIDMTKCIYCGLCQEACPVDAI 608
           IC AQ ITIEAE       RTTRYDIDMTKCIYCG CQEACPVDAI
Sbjct: 120 ICPAQAITIEAEPRADGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165


>AK223114-1|BAD96834.1|  210|Homo sapiens NADH dehydrogenase
           (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
           reductas protein.
          Length = 210

 Score =  131 bits (317), Expect = 2e-30
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = +1

Query: 262 AMSDRAAQTMFWTELARGFAVTLAHIFKEPATINYPFEKGPLSPRFRGEHALRRYPSGEE 441
           +++DRAA+T+ WTEL RG  +TL+++F+EPATINYPFEKGPLSPRFRGEHALRRYPSGEE
Sbjct: 50  SVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRFRGEHALRRYPSGEE 109

Query: 442 RCIACKLCE 468
           RCIACKLCE
Sbjct: 110 RCIACKLCE 118



 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 36/46 (78%), Positives = 36/46 (78%)
 Frame = +3

Query: 471 ICXAQXITIEAEDVRTVRGRTTRYDIDMTKCIYCGLCQEACPVDAI 608
           IC AQ ITIEAE       RTTRYDIDMTKCIYCG CQEACPVDAI
Sbjct: 120 ICPAQAITIEAEPRTDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 165


>BC119753-1|AAI19754.1|   64|Homo sapiens NDUFS8 protein protein.
          Length = 64

 Score = 47.2 bits (107), Expect = 5e-05
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +3

Query: 552 MTKCIYCGLCQEACPVDAI 608
           MTKCIYCG CQEACPVDAI
Sbjct: 1   MTKCIYCGFCQEACPVDAI 19


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,958,183
Number of Sequences: 237096
Number of extensions: 1696863
Number of successful extensions: 7190
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7190
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)