Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120922.seq
         (651 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7AUK9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A0UM59 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  

>UniRef50_A7AUK9 Cluster: Putative uncharacterized protein; n=1;
            Babesia bovis|Rep: Putative uncharacterized protein -
            Babesia bovis
          Length = 1919

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 106  SMKGTVNVLLLLMFINIAWSYCCFNIKLLLSIYNCI 213
            ++ G VN +LL    NIA  Y  FN KL LS  NC+
Sbjct: 1521 TLHGQVNSMLLRRLTNIAKYYQTFNRKLQLSFLNCV 1556


>UniRef50_A0UM59 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia multivorans ATCC 17616|Rep: Putative
           uncharacterized protein - Burkholderia multivorans ATCC
           17616
          Length = 164

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -2

Query: 116 PFILIT*TARRRDGQTFHDVHAAERRHA 33
           PF+ +  T   RD + FH+ HAA RRHA
Sbjct: 17  PFVKLANTRFPRDKRRFHETHAAGRRHA 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,933,743
Number of Sequences: 1657284
Number of extensions: 9915503
Number of successful extensions: 19734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19732
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)