Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120920.seq
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.64
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.84
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.84
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.84
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.1
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 4.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 4.5
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 22 6.0
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 7.9
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.9
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.64
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -1
Query: 465 QFQDLCKNLLHCRILRSCRCARICT*NCAC 376
+++ C L HC +C C C C C
Sbjct: 738 RYEAHCFALCHCCDFDACDCEMTCPAGCKC 767
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 375 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 464
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 375 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 464
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 375 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 464
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.84
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 375 NTHSFKYRYVHNDTNAKFYNVIDFCKGLEI 464
+ +++KY Y +N+ N K Y I++ + + I
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIEQIPI 120
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.6 bits (51), Expect = 0.84
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 638 LLLSKFNRIQNFQQPLLGREQCAQ 567
+L + N ++NF QPLL +Q Q
Sbjct: 1023 VLQADMNALKNFNQPLLVNDQLGQ 1046
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 36 RICKIQTWTRSRCSIGRTWTGIFFVTL 116
++ K TWT R +I +T TG F+T+
Sbjct: 487 QVIKQNTWTVFRDAITQTGTGPAFLTI 513
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +2
Query: 524 IIFHKQKSKRDLQLVGRIVRDQ 589
+ FH S+R+ + RI+RD+
Sbjct: 274 LFFHPLSSRREFAVSTRILRDE 295
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 625 NLTASKIFNNPCLVANNAPNELEI 554
N+TA+K NN + N N+ ++
Sbjct: 1015 NITATKQLNNKARIGNGPINQSDV 1038
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 151 IIIAVRCAYLFVNVTKNIPVHVRPIL 74
+I +RC YLF++V V P++
Sbjct: 1 MISMLRCIYLFLSVILITSYFVTPVM 26
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 584 DQAGVVENFGCG*ILTTKATRCC 652
+ A VENF G L KA R C
Sbjct: 473 NNAVAVENFKGGMYLRLKARRAC 495
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 584 DQAGVVENFGCG*ILTTKATRCC 652
+ A VENF G L KA R C
Sbjct: 473 NNAVAVENFKGGMYLRLKARRAC 495
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,403
Number of Sequences: 438
Number of extensions: 3613
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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