Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120919.seq
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p pro...   103   2e-22
AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB...   103   2e-22
AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA...   103   2e-22
BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p pro...    29   5.2  
AY060725-1|AAL28273.1|  515|Drosophila melanogaster GH17414p pro...    29   5.2  
AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-P...    29   5.2  
AF154416-1|AAD38395.1|  474|Drosophila melanogaster Cdk5 activat...    29   6.9  

>AY071239-1|AAL48861.1|   64|Drosophila melanogaster RE27904p
           protein.
          Length = 64

 Score =  103 bits (247), Expect = 2e-22
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = +3

Query: 81  MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 254
           MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+
Sbjct: 1   MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIV 58


>AE014296-593|AAN11541.1|   64|Drosophila melanogaster CG32276-PB,
           isoform B protein.
          Length = 64

 Score =  103 bits (247), Expect = 2e-22
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = +3

Query: 81  MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 254
           MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+
Sbjct: 1   MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIV 58


>AE014296-592|AAN11540.1|   64|Drosophila melanogaster CG32276-PA,
           isoform A protein.
          Length = 64

 Score =  103 bits (247), Expect = 2e-22
 Identities = 46/58 (79%), Positives = 52/58 (89%)
 Frame = +3

Query: 81  MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQII 254
           MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+
Sbjct: 1   MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIV 58


>BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p
           protein.
          Length = 1040

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 120 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIN 257
           A+K  T  G  PK  ++ E  +    WL+ +F+F +    +  II+
Sbjct: 652 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIIS 697


>AY060725-1|AAL28273.1|  515|Drosophila melanogaster GH17414p
           protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 120 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIN 257
           A+K  T  G  PK  ++ E  +    WL+ +F+F +    +  II+
Sbjct: 127 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIIS 172


>AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-PA
           protein.
          Length = 1040

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +3

Query: 120 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIN 257
           A+K  T  G  PK  ++ E  +    WL+ +F+F +    +  II+
Sbjct: 652 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIIS 697


>AF154416-1|AAD38395.1|  474|Drosophila melanogaster Cdk5
           activator-like protein protein.
          Length = 474

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 545 IEKETKIHRKFYIDTSTSLITLCIGVPF*PCKCER 441
           I+   +I RK  I  STS +  C+G+ F  C+C+R
Sbjct: 300 IKNTNQIPRKTVIQASTSELLKCLGM-FLHCRCQR 333


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,222,659
Number of Sequences: 53049
Number of extensions: 588783
Number of successful extensions: 1497
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)