Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120918.seq
         (655 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ...    30   1.5  
At5g17690.1 68418.m02073 like heterochromatin protein (LHP1) ide...    29   2.7  
At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote...    29   3.6  
At4g36010.1 68417.m05127 pathogenesis-related thaumatin family p...    28   4.7  
At2g17860.1 68415.m02069 pathogenesis-related thaumatin family p...    28   4.7  
At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)           28   6.2  
At2g04080.1 68415.m00391 MATE efflux family protein similar to h...    28   6.2  
At2g24810.1 68415.m02968 pathogenesis-related thaumatin family p...    27   8.2  

>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
           GP:3172044:gnl:PID:d1029570:AB010080
          Length = 1332

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
 Frame = -3

Query: 509 SRSVGHFFTHLFSVIKNEHKICQF-GRVFHQIPHGRATRPLGLLDLSVPTVKQNVFIVVN 333
           S +VG+ F   + +I++ H+IC       H   H    + L  L  S   ++ N F  + 
Sbjct: 507 SLAVGYLFEFFYPLIESGHRICSLDSGNKHNNSHVDTVKSLPFLSSSQQVLESNEFKPIG 566

Query: 332 HLLLAFGHFAFVLHDRHYVEDI 267
             ++  G       +  +V+DI
Sbjct: 567 EAVIKVGAALQASGEAVFVDDI 588


>At5g17690.1 68418.m02073 like heterochromatin protein (LHP1)
           identical to like heterochromatin protein LHP1
           [Arabidopsis thaliana] GI:15625407; contains Pfam
           profile PF00385: 'chromo' (CHRromatin Organization
           MOdifier)
          Length = 445

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 378 IKQPEWPSSPAMWDLVKNTPELADFVFIFDHTEKMGK 488
           IK   WP +   W+ ++N   +AD +  F+ + K GK
Sbjct: 127 IKWRGWPETANTWEPLENLQSIADVIDAFEGSLKPGK 163


>At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein
           similar to monoglyceride lipase from [Homo sapiens]
           GI:14594904, [Mus musculus] GI:2632162; contains Pfam
           profile PF00561: hydrolase, alpha/beta fold family
          Length = 324

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 397 LVARPCGIW*KTRPNWQILCSFLITLKRWVKKW---PTDRLV 513
           LVA  C I  K RP W +   FLI + R++  W   PT+ L+
Sbjct: 161 LVAPMCKISDKVRPKWPV-DQFLIMISRFLPTWAIVPTEDLL 201


>At4g36010.1 68417.m05127 pathogenesis-related thaumatin family
           protein similar to receptor serine/threonine kinase PR5K
           [Arabidopsis thaliana] GI:1235680; contains Pfam profile
           PF00314: Thaumatin family
          Length = 301

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 140 EDCCSGMFTMFDFCKPLKRPACILDDIFF*CPTAWQFVCDEDT 12
           E CCSG F   D CKP +      +     CP A+ +  D+ T
Sbjct: 196 EYCCSGAFGTPDTCKPSEYSQFFKNA----CPRAYSYAYDDGT 234


>At2g17860.1 68415.m02069 pathogenesis-related thaumatin family
           protein similar to receptor serine/threonine kinase PR5K
           [Arabidopsis thaliana] GI:1235680; contains Pfam profile
           PF00314: Thaumatin family
          Length = 253

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 140 EDCCSGMFTMFDFCKPLKRPACILDDIFF--*CPTAWQFVCDEDT 12
           E CC+G F   D C+P +        +FF   CPTA+ +  D+ T
Sbjct: 195 EFCCNGAFGTPDTCQPSEY------SVFFKKTCPTAYSYAYDDGT 233


>At4g36870.1 68417.m05228 BEL1-like homeobox 2 protein (BLH2)
          Length = 638

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 542 QRAKXDRLRCLPTQIWAELKESCEM 616
           Q+A     RCL   + A+LK+SCE+
Sbjct: 429 QKAMSRHFRCLKDAVAAQLKQSCEL 453


>At2g04080.1 68415.m00391 MATE efflux family protein similar to
           hypothetical protein GB:AAC27412; contains Pfam profile
           PF01554: Uncharacterized membrane protein family
          Length = 476

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 337 TTINTFCLTVGTLRSSSPSGLVA 405
           T++ + CLT+GTL    PSG+ A
Sbjct: 287 TSVLSICLTIGTLHYVIPSGVAA 309


>At2g24810.1 68415.m02968 pathogenesis-related thaumatin family
           protein similar to thaumatin-like protein [Arabidopsis
           thaliana] GI:2435406; contains Pfam profile PF00314:
           Thaumatin family
          Length = 193

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 140 EDCCSGMFTMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 21
           E CC+G F+  + C P K            CPTA+ +V D
Sbjct: 139 EYCCTGAFSKPETCPPTKYSKIFKGA----CPTAYSYVYD 174


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,666,441
Number of Sequences: 28952
Number of extensions: 307524
Number of successful extensions: 844
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)