Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120917.seq
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protei...   138   1e-31
UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e...    67   3e-10
UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25...    42   0.017
UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21...    35   1.9  
UniRef50_Q23JY6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, wh...    34   3.4  
UniRef50_Q9ZNK7 Cluster: Orf9u; n=5; Clostridium|Rep: Orf9u - Cl...    33   4.5  
UniRef50_UPI000150A002 Cluster: TPR Domain containing protein; n...    33   5.9  
UniRef50_A6H281 Cluster: Probable multidrug resistance protein. ...    33   5.9  

>UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protein
           E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived
           virus envelope protein E25 - Orgyia pseudotsugata
           multicapsid polyhedrosis virus (OpMNPV)
          Length = 229

 Score =  138 bits (333), Expect = 1e-31
 Identities = 71/136 (52%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
 Frame = +2

Query: 248 IEQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANF 427
           + Q+Y+AEKP+S+DDI K+G+ +VG NS+F+GTVYD GV+SPNA   S++VT+TR TANF
Sbjct: 72  VSQVYVAEKPMSMDDIEKQGNARVGANSLFIGTVYDQGVRSPNAPGASNDVTVTRTTANF 131

Query: 428 DIKEFKSMFIVFKGITPTK-TVEDNGMLDSKSTA*LCA*STPTRGRCPNERC-ANCANSN 601
           D+KE+K+MFIV KG+ P K T EDN +  +     +C           +ER  A    S 
Sbjct: 132 DVKEYKNMFIVVKGLPPAKMTKEDNMLCFTVDGLHVCL--VDANAAPLSERVFARLPPSA 189

Query: 602 CTLVYTKNEAAQQVLL 649
           CTLVYT+N AAQQ+LL
Sbjct: 190 CTLVYTRNSAAQQLLL 205



 Score = 69.7 bits (163), Expect = 6e-11
 Identities = 34/57 (59%), Positives = 46/57 (80%), Gaps = 2/57 (3%)
 Frame = +3

Query: 93  WTNA-LNLNSLTEASPSLGQSSESVESD-ENKRLNVKLNNARVANLRIAHGDNKLSK 257
           W N  LNLNSLTE+SPSL QSS+SV+ D + ++LNVKL N ++  +R+AHGDNK+S+
Sbjct: 18  WYNGKLNLNSLTESSPSLAQSSDSVQVDPQTEQLNVKLGNNKMTYMRVAHGDNKVSQ 74


>UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e25
           - Helicoverpa armigera NPV
          Length = 230

 Score = 67.3 bits (157), Expect = 3e-10
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
 Frame = +2

Query: 248 IEQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSP--------NAASTSSNVT 403
           I ++ +AE+PL+  +I+ EG+  VG N +F+GT+ +    S          +A +S   T
Sbjct: 69  ISKVCVAERPLTYSEIIDEGNRTVGANCVFMGTISEPSQTSTLNQQQQQQQSAGSSLPTT 128

Query: 404 MTRGTANFDIKEFKSMFIVFKGITPTKTVEDNGMLDSKS 520
             R TANFDIK+FK+ FIVFK +   K  E   M+  +S
Sbjct: 129 ANRVTANFDIKQFKNTFIVFKNVEMIKIKESANMVRYES 167



 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 99  NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSK-CI 263
           N LN +SL ++S   GQSSES+  +   +L +K N+ R+  +RI HGDNK+SK C+
Sbjct: 22  NKLNFDSLNDSS---GQSSESIRENNQGQLTLKFNSPRIKTMRILHGDNKISKVCV 74


>UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25 -
           Adoxophyes orana granulovirus (AoGV)
          Length = 217

 Score = 41.5 bits (93), Expect = 0.017
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 93  WTN-ALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSKCI 263
           W N  LN NSL  +S S G   +S++       NV  NN +  N+RIA+G+N  SK +
Sbjct: 19  WVNDKLNANSLNTSSESSG---DSIQFTPEGNANVIFNNTKSKNVRIAYGENNFSKIV 73



 Score = 41.1 bits (92), Expect = 0.022
 Identities = 24/68 (35%), Positives = 40/68 (58%)
 Frame = +2

Query: 269 EKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKS 448
           E P+  + I++ G +K G N+I LG + +      N  +++ N   TR + N  IK+FK+
Sbjct: 76  ETPIRHEQIIEHG-DKAGANTICLGIIKEN--LGSNVGNSNVN---TRFSNNLTIKQFKN 129

Query: 449 MFIVFKGI 472
           +FI FKG+
Sbjct: 130 LFITFKGL 137


>UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21.9;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F12P21.9 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 97

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = +2

Query: 290 DIVKEGSNKVGTNSIFLGTVYDYGVKSP-------NAASTSSNVTMTRGTANFDIKEFKS 448
           D +KE   +VGT+SIF  +     + SP       + +S S++ + T G   F + E + 
Sbjct: 31  DTIKEEEREVGTDSIFPSSFNSKKISSPFTSPYSSSVSSASASASCTSGLNKFPVTENRG 90

Query: 449 MFIVFK 466
            F VFK
Sbjct: 91  SFPVFK 96


>UniRef50_Q23JY6 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3032

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
 Frame = +2

Query: 215  GQFAHRTRR**IEQMYI-----AEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNA 379
            G +A  T R  +   Y       + P  +D+I    SNK+GT+       Y   +K  + 
Sbjct: 1586 GNYAQMTSRTNVSMQYQDGDIKGQSPYRLDEI----SNKLGTSEYKQENKYSMPLKRMDI 1641

Query: 380  ASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDNGMLDSK 517
            A  + N  +   T NF   E K   I F+G     T  D+  L+ K
Sbjct: 1642 ADITYNKAIILKTKNFTTDEEKGRVIAFEGSHFLPTELDSNYLEKK 1687


>UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_44,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1155

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 99  NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKL 251
           N +  N L E +  + Q +  +++ E +R   KLNN    NL+I + +NKL
Sbjct: 544 NLIQQNKLQEQNVQIQQLTVQIQNMEEQRNEFKLNNQIFQNLKIKYVNNKL 594


>UniRef50_Q9ZNK7 Cluster: Orf9u; n=5; Clostridium|Rep: Orf9u -
           Clostridium histolyticum
          Length = 215

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -2

Query: 522 VDFESNMPLSSTVLVGVIPLNTINMDLN 439
           V+  S MP+S T++VG IP + I +DLN
Sbjct: 181 VEVYSEMPISETIIVGKIPDSAIQLDLN 208


>UniRef50_UPI000150A002 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1353

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = +3

Query: 99  NALNLNSLTEASPSLGQSSESVESDENKR---LNVKLNNARVANLRIAHGDNKLSKCILP 269
           NALN NS  +++  L   + S  S++NK     N+ LNN   + +++   D+  S C   
Sbjct: 225 NALNANSFKQSNQKLNNKTFSRSSNQNKEKQGQNLSLNNISNSVIQVKKVDSNKSNCDSE 284

Query: 270 KN 275
           +N
Sbjct: 285 RN 286


>UniRef50_A6H281 Cluster: Probable multidrug resistance protein.
           AcrB/AcrD/AcrF family protein; n=1; Flavobacterium
           psychrophilum JIP02/86|Rep: Probable multidrug
           resistance protein. AcrB/AcrD/AcrF family protein -
           Flavobacterium psychrophilum (strain JIP02/86 / ATCC
           49511)
          Length = 1154

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
 Frame = -2

Query: 603 QLEFAQFAHLSFGQRPRVGVDQAHN--HAVDFESNMPLSSTVLVGVIPLNTINMDLNSLI 430
           +LE A+ ++L    +  +  DQ+    H VD  SN  +   VLV ++ + T+ +  NSL 
Sbjct: 313 KLEKAKVSYLPKDLKLELSNDQSSRVEHQVDELSNHIIFGIVLVMIVLMFTMGLR-NSLF 371

Query: 429 SKFAVPRVMVTLLDVLAAFG 370
              A+P  M+    +L+AFG
Sbjct: 372 VGAAIPLSMMMAFTILSAFG 391


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,892,175
Number of Sequences: 1657284
Number of extensions: 13184321
Number of successful extensions: 37355
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37345
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)