Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120917.seq
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   4.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.3  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   6.3  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   6.3  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   6.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.4  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 595 ICAIRAPLVRTAAPCWGRSSTQSCCR 518
           + A+ A ++R  AP W  ++    CR
Sbjct: 789 LAAVAASIIRYGAPVWTEATDLQWCR 814


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 15/61 (24%), Positives = 25/61 (40%)
 Frame = -2

Query: 324 VPTLLEPSLTMSSIDSGFSAIYICSIYYRRVRCANWPPGRY*ALRLIVCSRLIPPIRCSA 145
           V T+ E    M +I    +  +IC+    R R    P       + ++C  L   +R S+
Sbjct: 62  VATIAEMDRIMGNIAGNSTEAFICTPVLSRQRATRAPTTSTWTSKSVLCEELFLFLRRSS 121

Query: 144 L 142
           L
Sbjct: 122 L 122


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 623 FSCTPECSWNLRNSRTSRSD 564
           F CTP  S   RN+RT+  D
Sbjct: 83  FICTPVLSRQRRNARTNNVD 102


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 570 TRGARIAQIPTALWCTRKTR 629
           TRG R  + PT+ W +R++R
Sbjct: 21  TRGRRWPRPPTSCWPSRRSR 40


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 643 NLLSCLVFRVHQSAVGICAIRAPLVRTAA 557
           + L+ +V+ +H +    C I APL R +A
Sbjct: 216 HFLNVMVYDMHGAWDSYCGINAPLYRGSA 244


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 317 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 448
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 317 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 448
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,441
Number of Sequences: 2352
Number of extensions: 14672
Number of successful extensions: 43
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)