Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120916.seq
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 2.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 6.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 6.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 6.0
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 7.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 7.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 7.9
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 7.9
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 7.9
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 217 CHIDDDDYKSALNA*ILIITAFAQKKCFATC 309
C I +++ NA +L ITAF ++ A C
Sbjct: 127 CIIQSFAAETSANATVLTITAFTVERYIAIC 157
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 621 VDKKHVGKTSGAVVILTQLSVYSS-TPYALVISICSANLPNQTHRC 487
VD+ V KTS +LT L Y++ T L + +P C
Sbjct: 1162 VDEMEVRKTSALTTVLTGLRKYTNYTIQVLAFTRVGDGVPTTVTYC 1207
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.4
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 621 VDKKHVGKTSGAVVILTQLSVYSS-TPYALVISICSANLPNQTHRC 487
VD+ V KTS +LT L Y++ T L + +P C
Sbjct: 1158 VDEMEVRKTSALTTVLTGLRKYTNYTIQVLAFTRVGDGVPTTVTYC 1203
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 148 DCFEAVVCENGGLFVLTGGAAV 213
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 148 DCFEAVVCENGGLFVLTGGAAV 213
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +1
Query: 148 DCFEAVVCENGGLFVLTGGAAV 213
DC +A+ N L V++GG+ +
Sbjct: 425 DCLKAIKENNADLTVVSGGSVL 446
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 441 IDLHLNRHIKCIKTQYNDEFD 503
+D+ L+ I C+ + + EFD
Sbjct: 59 LDVRLDYRISCLLSIFKQEFD 79
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 503 IKLIVVLCFYAFYMAV*VQIDL 438
I I++L + FY+ V ++IDL
Sbjct: 113 IYYIIILAWALFYLLVSLRIDL 134
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 503 IKLIVVLCFYAFYMAV*VQIDL 438
I I++L + FY+ V ++IDL
Sbjct: 166 IYYIIILAWALFYLLVSLRIDL 187
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.4 bits (43), Expect = 7.9
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +2
Query: 74 ILRQRILKIACAIKLWLKQSWHLSKIVSKP*FAKTEVYSC*LEARL*HAISTTTT 238
+ +++ + + AIK W+++ H+ ++V+ A + Y A L H ++TT T
Sbjct: 91 LTKKQEMLVRSAIKYWVERHKHIVRLVT----AIGDAYGV---ALLLHMLTTTIT 138
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 441 IDLHLNRHIKCIKTQYNDEFD 503
+D+ L+ I C+ + + EFD
Sbjct: 27 LDVRLDYRISCLLSIFKQEFD 47
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,118
Number of Sequences: 438
Number of extensions: 3126
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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