Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120915.seq
         (645 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P41450 Cluster: Uncharacterized 22.7 kDa protein in GTA...   221   9e-57
UniRef50_P53110 Cluster: Uncharacterized protein YGL159W; n=2; S...    34   3.4  
UniRef50_O51362 Cluster: Glutamate transporter, putative; n=3; B...    33   7.8  
UniRef50_A0Q177 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_Q7RTE9 Cluster: Streptococcus pyogenes AMV258, putative...    33   7.8  

>UniRef50_P41450 Cluster: Uncharacterized 22.7 kDa protein in
           GTA-P79 intergenic region; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 22.7 kDa
           protein in GTA-P79 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 192

 Score =  221 bits (541), Expect = 9e-57
 Identities = 105/124 (84%), Positives = 109/124 (87%)
 Frame = +1

Query: 250 FLTKKIINVYNKTEMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRGVDTCITLQQLVKM 429
           FLTKKIINVYNKTE CIRATFDGRYVVT D+LMCFVNKSY+KQLLR VDT ITLQQLVKM
Sbjct: 69  FLTKKIINVYNKTEKCIRATFDGRYVVTRDVLMCFVNKSYMKQLLREVDTRITLQQLVKM 128

Query: 430 YSPEFGLCVNSKNMFVLTESVLTSIS*NTRLGKCEWLDKNIKTVCLQLRKLCINNKQHTT 609
           YSPEFG  VNSK MFVLTESVL SI      GKCEWLDKNIKTVCLQLRK+CINNKQH+T
Sbjct: 129 YSPEFGFYVNSKIMFVLTESVLASICLKHSFGKCEWLDKNIKTVCLQLRKICINNKQHST 188

Query: 610 CLPY 621
           CL Y
Sbjct: 189 CLSY 192



 Score =  113 bits (272), Expect = 3e-24
 Identities = 58/70 (82%), Positives = 60/70 (85%)
 Frame = +2

Query: 44  MLPYEMVISVLVYLSPAQILNLNLPLAYQKSVLFASNSAKVNERIRRLARXXXXXXXSYF 223
           MLPYEMVI+VLVYLSPAQILNLNLP AYQKSVLFASNSAKVNERIRR AR        YF
Sbjct: 1   MLPYEMVIAVLVYLSPAQILNLNLPFAYQKSVLFASNSAKVNERIRRRAR-DDNDDDPYF 59

Query: 224 YHKQFIKINF 253
           Y+KQFIKINF
Sbjct: 60  YYKQFIKINF 69


>UniRef50_P53110 Cluster: Uncharacterized protein YGL159W; n=2;
           Saccharomyces cerevisiae|Rep: Uncharacterized protein
           YGL159W - Saccharomyces cerevisiae (Baker's yeast)
          Length = 370

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -2

Query: 590 LIQSFLNCKHTVFIFLSNHSHLPKRVF*EID-VNTDSVNTNIFLLFTHKPNSGLYILTS 417
           +I+S L+   ++ ++  NH  L  R+F ++D  N DS  ++IF+    K  SG+ IL +
Sbjct: 23  IIESLLSLHESLRLYSQNHEILLNRMFKKLDETNADSNISHIFMPVVSKDFSGIKILVN 81


>UniRef50_O51362 Cluster: Glutamate transporter, putative; n=3;
           Borrelia burgdorferi group|Rep: Glutamate transporter,
           putative - Borrelia burgdorferi (Lyme disease
           spirochete)
          Length = 400

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -2

Query: 554 FIFLSNHSHLPKRVF*EIDVNTDSVNTNIFLL-FTHKPNSGLYILTSCCS 408
           FI L ++S LP  ++   +++  S  + +F+  F H PNS +YI+T  CS
Sbjct: 303 FIILKSYSSLPISIY---EISYMSTLSFVFVFAFPHIPNSLIYIITMLCS 349


>UniRef50_A0Q177 Cluster: Putative uncharacterized protein; n=1;
           Clostridium novyi NT|Rep: Putative uncharacterized
           protein - Clostridium novyi (strain NT)
          Length = 200

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +1

Query: 244 D*FLTKKIINVYNKTEMCIRATFDGRYVVTHDILMCFVNKSYVKQLLRGVDTCITLQQLV 423
           D  LTK +IN Y K ++ I      +Y   H IL+  +   Y+KQ L   D  +  + ++
Sbjct: 53  DKILTKTMINNYTKAKILIPPV-KKKYSKNHIILLILIY--YLKQNLSINDISLLFKDVI 109

Query: 424 KMYSPEFGLCVNSKNMF 474
           K  S      +N KN++
Sbjct: 110 KDLSDSENTTLNLKNLY 126


>UniRef50_Q7RTE9 Cluster: Streptococcus pyogenes AMV258, putative;
           n=3; Plasmodium (Vinckeia)|Rep: Streptococcus pyogenes
           AMV258, putative - Plasmodium yoelii yoelii
          Length = 832

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 14  DIN*NTKLCNMLPYEMVISVLVYLSPAQILNLNLPLAYQKSVLFASNSAKVNER 175
           DIN      N L  E  I++ V    +QI N+N+   Y + +LF +N  + N R
Sbjct: 276 DINKYFTDVNFLQLEFPIAIKVINILSQIKNINIEFKYDEIILFVNNFLRTNTR 329


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,231,231
Number of Sequences: 1657284
Number of extensions: 10449416
Number of successful extensions: 21993
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21979
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)