Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120914.seq
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    29   0.17 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   0.90 
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   3.6  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    24   4.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.4  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 505 VATQIWRKQPIAHFVCQRNDCGSTRR*NGLGQ 600
           ++T +WR+    H++C  N CG   + NG+ +
Sbjct: 126 ISTPLWRRDGTGHYLC--NACGLYHKMNGMNR 155


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 285  RPALPRYLEHVLDLVGMLKRRFVLAV 208
            R AL  Y  HV D+VG+L   F+ A+
Sbjct: 2425 RKALQIYNSHVPDIVGVLNNHFMTAL 2450


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 186 TGNTCPRRRQVQIDV*ACRPNPAHAPD 266
           T +  PR   VQI V A   +PAH P+
Sbjct: 396 TRHVIPRHVGVQIPVYAIHHDPAHYPE 422


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 186 TGNTCPRRRQVQIDV*ACRPNPAHAPD 266
           T +  P+R  VQI   A + +P H PD
Sbjct: 396 TKHVIPKRTLVQIPAYAIQRDPDHYPD 422


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 4/8 (50%), Positives = 6/8 (75%)
 Frame = -2

Query: 266 IWSMCWIW 243
           +W  CW+W
Sbjct: 787 VWDCCWVW 794


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,575
Number of Sequences: 2352
Number of extensions: 14365
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)